Gene Bpro_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3220 
Symbol 
ID4014105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3408234 
End bp3409460 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content64% 
IMG OID637942887 
Productphosphonoacetate hydrolase 
Protein accessionYP_550032 
Protein GI91789080 
COG category[R] General function prediction only 
COG ID[COG1524] Uncharacterized proteins of the AP superfamily 
TIGRFAM ID[TIGR02335] phosphonoacetate hydrolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.169874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG ACATTACCGT GAACGACAGG CGCTACCAAT GGATGGACCA CCCGGTGGTG 
GTGGTCTGCG TGGACGGCTG CCAGTACGAA TACATCACCG CCGCCGTGGC GGCCGGCGTG
GCACCCTTCC TGGGCAGGCT GCTGGCCGGG CGCGGCACCT GCTACATGGC GGACTGCGTC
ATTCCAAGTT TCACCAACCC GAACAACCTG TCCATCGTGA CGGGTGCGCC ACCCTCGGTG
CACGGCATCT GCGGCAACTA CTTCTTCGAC CGCGAGCGGG GTGAAGAGGT GATGATGAAC
GACCCCCGCT ACCTGCGCGC GGGCACCATC CTGGCAGCCT TCGCCGATGC GGGCGCCAAG
GTGGCCGTGA TCACGGCGAA GGACAAACTG CGCAAGCTGC TGGGCCACAA AATGGACGGC
ATCTGCTTTT CCTCGGAAAA GGCCGACCAG GTGAGCGTCG AGGAAAACGG CATTGACGAC
GTGCTCGGCA TGGTCGGCAT GCCGGTGCCT TCGGTCTACA GCGCCGAGCT GTCGGAGTTC
GTGTTTGTCG CCGGCGTCAA GCTGATGGAG CGCGAGCGGC CTGACCTGAT GTATTTGTCC
ACTACCGACT ACATCCAGCA CAAGGCAGCC CCCGGCACCA CGATGGCAAA CGACTTCTAC
GCCATGATGG ATCGCAACCT CGCCCGTCTG GACATGCTGG GCGCCACCAT TGTGCTCACC
GCGGACCACG GCATGAACGA CAAGCACGGC CGGGACGGGC AGCCCAATGT GATTTACCTG
CAGGACACGC TGGACGAATG GATTGGCCAG GACCATGCCC GCGTCATCCT GCCCATCACC
GACCCGTATG TGGTGCACCA CGGCGCGCTC GGCTCATTCG CGCTCGTCTA TGTGCCGGAA
GATGTGGACG CCAGCGCGCT GCGTGACCGC ATTGCCGCGC TGCCAGGCAT TGAGACGGTG
CTGTCGCGCC TGGAGGCCTG CGACCATTTC GAGCTGCCGT TCGACCGGGT TGGAGACATC
GTGGTGGTGG CAAGCCAGGA CACAGTGATC GGCACCAACG CCGAGCGCCA TGACCTCTCG
GGGCTGGACG TGCCGCTGCG CTCCCACGGG GGCGTGTCGG AGCAGAAAGT GCCGCTGGTC
GTCAACCGCC AGGTGCCCCA GGCCTTCCCC GACCGGCGCT GGCGCAATTT TGACGCCTTC
GAGCTCGGCC TCAACCTGGC CCGCTGA
 
Protein sequence
MNKDITVNDR RYQWMDHPVV VVCVDGCQYE YITAAVAAGV APFLGRLLAG RGTCYMADCV 
IPSFTNPNNL SIVTGAPPSV HGICGNYFFD RERGEEVMMN DPRYLRAGTI LAAFADAGAK
VAVITAKDKL RKLLGHKMDG ICFSSEKADQ VSVEENGIDD VLGMVGMPVP SVYSAELSEF
VFVAGVKLME RERPDLMYLS TTDYIQHKAA PGTTMANDFY AMMDRNLARL DMLGATIVLT
ADHGMNDKHG RDGQPNVIYL QDTLDEWIGQ DHARVILPIT DPYVVHHGAL GSFALVYVPE
DVDASALRDR IAALPGIETV LSRLEACDHF ELPFDRVGDI VVVASQDTVI GTNAERHDLS
GLDVPLRSHG GVSEQKVPLV VNRQVPQAFP DRRWRNFDAF ELGLNLAR