| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3196 |
|---|
| Symbol | |
|---|
| ID | 4014120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3380540 |
|---|
| End bp | 3381595 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637942863 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_550008 |
|---|
| Protein GI | 91789056 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.512229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA CCAAAAGCGA ACGCATGGAA CTTCAACAGC AAGCTGCCGC GAGGAACGCC
CGAGCCGATT CGGCGCGCCA CGCCCGATTG ATCCTGCTGC TGGCCGATGG GCTCACCTGG
GCTGAGATTC GCGCCAAGCT GGACTGCAGC GACAGCTATA TTGATCGCTG GAGCAAACGC
TTTGAAAGTG ATCGCCTGGC CGGCCTGTTC GCTCGTCATG CCGGGCGCGA GCGCTACAAG
GTGACTGATC GCCTGGAGGC GCGTGTGCTG GCGCGAACCA CCAAACACAA GCCGGCTGAC
GGCTCCACGC ACTGGTCCTC GCGCAAACTG GCAGCTGAAC TGGGCGGCGA TATCTCCCAC
ATGACGGTGG CCCGGATCTG GGCCAGGCAC GGCATCAAGC CGCATTTGCT GGAAGGCTAT
CTCACCTCCA ACGATCCGGA CTTTGAGACC AAGGCTGCCG ATGTCATCGG GCTGTACCTG
AACCCGCCTC AGAACGCCGT GGTGTTCCGT GTCGATGAAA AGACCGCGAT TCAGGCGCTG
GATCGGCTGG ACCCGGTGCT GCCGCTGTCG CCGGGGCGCG CCGAGCGACA CGGCTTTGAG
TATTTCCGGC ACGGCACGCT CTCCTTGTAC GCGGCCTTCA ATACCAAGAC CGGTGAGGTG
CTGGGCAAGA CGGCCACTCG CCATACCTCG GCCGAGTTCG TCGCGTTTCT CACCGATATC
GTGGCCAACC AGCCCAAGGG CAAAGAGATT CACGTCATCG CCGACAACCT CTCGGCCCAC
AAGACCAAGC ACGTCGAGCA GTTCCTGGCC ACGCACAGCA ACGTTCATAT GCACTTCACC
CCGACGTACT CGTCCTGGCT CAACCAGGTG GAGTTGTGGT TTGCCAAGAT CGAGCGCGAT
GTCATCGCCC GTGGCGTGTT CACGTCTTTG CCTGATCTGA AGCGAAAACT CATGCGCTAC
ATCCGCCAGT ACAACGAGCA ACCCAAACCC GTGAAATGGA AGTACTGTGA TTTGTCACGG
CGTATCACTC CCGATTCAAT CGTTACAGTC CACTAG
|
|---|
| Protein sequence | MKLTKSERME LQQQAAARNA RADSARHARL ILLLADGLTW AEIRAKLDCS DSYIDRWSKR
FESDRLAGLF ARHAGRERYK VTDRLEARVL ARTTKHKPAD GSTHWSSRKL AAELGGDISH
MTVARIWARH GIKPHLLEGY LTSNDPDFET KAADVIGLYL NPPQNAVVFR VDEKTAIQAL
DRLDPVLPLS PGRAERHGFE YFRHGTLSLY AAFNTKTGEV LGKTATRHTS AEFVAFLTDI
VANQPKGKEI HVIADNLSAH KTKHVEQFLA THSNVHMHFT PTYSSWLNQV ELWFAKIERD
VIARGVFTSL PDLKRKLMRY IRQYNEQPKP VKWKYCDLSR RITPDSIVTV H
|
|---|
| |