| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3084 |
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| Symbol | |
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| ID | 4014242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3251834 |
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| End bp | 3253705 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637942751 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_549896 |
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| Protein GI | 91788944 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00985997 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0142053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGTTT CAGTGGTCCA GTTGCTGGGC GGGCTGTCGT ATGCGACCAC GCTGTTTTTG
ATGGCGGCGG GCCTGACGTT GATTTTCGGC GTCACGCGCA TCGTCAATTT TGCGCATGGC
AGTTTCTTCA TGCTGGGGGC GCTGTTCACC GCGCACTGGG TCACCGAATG GTTTCCGGCG
TGGGGCGAGA GTGCGCCCCT TTACCTGCTG GCTATTCTTT TTGGAGCTGC CTGCGCCGGG
CTGGTTGGGG CTTTAGCCGA TTTTCTTCTC CTGAGAAGAA TGAGCGGCGC GCCGGAGTTG
TACCAGCTGG TCGCGACGTT CGGCCTGACG CTGGCGCTGC ATGACGCCAT GCAGTGGGGC
TTTGGCCCCG ACGAGGTGTT TGCGCCGCGT TTTCCGGGGC TCAAGGGCTC GGTGCAGATG
GGTGATGAGT TCTTTCCGGT GTATCAGCTC GTGATGATTG CGCTGGGCCC GCTGGTCTGG
CTGGGCCTTC ATCTGCTGCT GCGTCACTCG CTGTTTGGTC GGCGCCTGCG CGCCGCCACG
CAAGACCGGT CGATGCTGGC GGCGCTCGGC GTCAACCCCA AACCGCTGAT GCTGGGAGCG
GTGGTCCTCG GCTGCGCGCT GGCCGGCTTG GGCGGGGCCC TGCAATTGCC CCGTGAACCG
GCGCACCTGC AAATGGACAT GAACGTGATT GTCGAGACCT TTGTCGTGGT CGTCACGGGC
GGCCTGGGCA GCATCGGGGG CGCATTTGTG GCGGCCCTGC TGATCGGCCT CGTGCATGCC
CTGGGTATCG CCGTGCTGCC GCAGGCCACG CTGGTCATCG TCTTTTTGAC CATGGCGGCG
GTGCTGGTGC TCAGGCCCCA GGGGCTCAAT GGTCTGTCGG TGGCTTCGCA GGAGGGCGTG
CGCGAGCCGG CGCAGCGGTT TCGCGGCCTG GACCTGACGC GCTTCTGGAA CGGCGCCATT
GCCGCGGTGC TGGTGCTACT GTCGGGGCTG GCCTGGCAGG GCGGGGCATA CTGGCAAACG
CTGGCGGCCG ATGCGTTGAT TCTGTTGATT TTTGGCATCA GCCTGCAGTC GATGATGGCG
CTCGGCGGCC TGGTCAGCTT TGGCCATGCA GCTTTTTTTG CACTGGGCGG CTATGGTGCG
GCCCTGTCGC ACAGCCTGTG GGGTGCATCG CTGCCGGTCG CCCTGGCGGC GGGTTGCGTG
ACGGCCCTGG TGGTCGCCGC CGTGTTTGGC GCTGCGGTGG TGCGCAGCGC CGGGGTGTAC
CTGGCCATGC TGTCGCTGGC GCTGGCACAG GTGATCTGGG CCGGGGCCAC CCAGTGGGTC
AGCCTCACCG GAGGCGACAA CGGCCTGATC GGGCTGGCCC TGGTGGAAGA GGAGGGCCGG
CCGCTGTTTT TCGCGCTGCT GGTGGTGCTG GCGCTGGCTT GCGTGTTGGC GCTGCGCCTG
CTGAGCCGGT CGGTCATGGG GGCGGCGCTG CAGGCTGTGC GCGACGCGCC CGCGCGGGCG
GCCGCTTCCG GCTTGCCCGT GGGCTGGCTC AAGTACCGCG TCTTTCTGGA GAGTGCGGTG
CTGGCAGGCC TTGCCGGCGG CCTGTTTGCC GCGCACAAGG GCGCGGTGTT TCCCTCCATC
GCCGCGGTGG CTACCTCGGT GGATGCCTTG CTGGTGGTTT TGCTCGGCGG CGTTCACCAG
CTTTGGGGCG CCGTGGTGGG CAGCGCCGTG TTGAGCTATG TCAGCGCGGA GCTGGGCCGT
GAAGTGACGT ACTGGCGGGG ATTGCTGGGC CTCTTCATCA TGCTGGTGAT GGTGGCTTCA
CCGTCGGGTT TGCTGGGCCT GCTGGGCAGC CGCACCCGCC CGGCCGAGCG GGCAACCGGG
AGGGCGGGCT GA
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| Protein sequence | MTVSVVQLLG GLSYATTLFL MAAGLTLIFG VTRIVNFAHG SFFMLGALFT AHWVTEWFPA
WGESAPLYLL AILFGAACAG LVGALADFLL LRRMSGAPEL YQLVATFGLT LALHDAMQWG
FGPDEVFAPR FPGLKGSVQM GDEFFPVYQL VMIALGPLVW LGLHLLLRHS LFGRRLRAAT
QDRSMLAALG VNPKPLMLGA VVLGCALAGL GGALQLPREP AHLQMDMNVI VETFVVVVTG
GLGSIGGAFV AALLIGLVHA LGIAVLPQAT LVIVFLTMAA VLVLRPQGLN GLSVASQEGV
REPAQRFRGL DLTRFWNGAI AAVLVLLSGL AWQGGAYWQT LAADALILLI FGISLQSMMA
LGGLVSFGHA AFFALGGYGA ALSHSLWGAS LPVALAAGCV TALVVAAVFG AAVVRSAGVY
LAMLSLALAQ VIWAGATQWV SLTGGDNGLI GLALVEEEGR PLFFALLVVL ALACVLALRL
LSRSVMGAAL QAVRDAPARA AASGLPVGWL KYRVFLESAV LAGLAGGLFA AHKGAVFPSI
AAVATSVDAL LVVLLGGVHQ LWGAVVGSAV LSYVSAELGR EVTYWRGLLG LFIMLVMVAS
PSGLLGLLGS RTRPAERATG RAG
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