Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2988 |
Symbol | |
ID | 4014335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3143364 |
End bp | 3144116 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637942653 |
Product | ABC transporter related |
Protein accession | YP_549800 |
Protein GI | 91788848 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.682077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.759622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAA TACTCCTGTC GGCAAGGAGT CTGACCAAAC GCTTTGGCGG CCTGGCGGCG GTCAACGATG TTTCTGTCGA TCTCTGGCGC AACCACATCC ATGCGGTGAT CGGCCCCAAT GGGGCGGGCA AGTCGACGCT GACCAACCTG CTGTCGGGGG ACCTGCCACC GAGCTCGGGC ACGGTGATGC TGGGCGGGCA CGACGTGACG GGCTGGAGCC CGGAGAAGAT TTCAAACCAG GGCCTGGGGC GCAGCTACCA GAAGACCAAC ATCTTCCTGC CCTTCACGGT CTGGGAGAAC GTGCGGCTGG CCGCGCAGTC GCGCCAGCCG CGGGCGGCAC GCTGGCTCAG CCGTGCCAGC CGATTTACGG CCATCAACGA GCGGGCCGAG CGGGCGCTGG CGCTGGCCGG GCTGCAGAGC CGCCGGCACA GCATCGCCGG CACCATCAGC CACGGCGAGC AGCGCCAGCT GGAGATTGCC ATGACGCTGG CCACCGAGCC GCAGGTGCTG CTGCTGGACG AGCCGCTGGC GGGCATGGGG GTGGCGGAGG CCGAGCGCAT GGTGGCGCTG CTGCTGGCGC TGAAACAAGA GCACGGCATC TTGCTGGTCG AGCATGACAT GGATGCGGTG TTTGCGCTGG CCGACCAGCT GACGGTGATG GTCAACGGCC AGGTGATCGC CAGTGGCACG CCGGCGCAGA TCCGGGCCGA TGCCGGGGTG CAGGCCGCTT ACTTGGGCGA GGAACACGCA TGA
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Protein sequence | MAEILLSARS LTKRFGGLAA VNDVSVDLWR NHIHAVIGPN GAGKSTLTNL LSGDLPPSSG TVMLGGHDVT GWSPEKISNQ GLGRSYQKTN IFLPFTVWEN VRLAAQSRQP RAARWLSRAS RFTAINERAE RALALAGLQS RRHSIAGTIS HGEQRQLEIA MTLATEPQVL LLDEPLAGMG VAEAERMVAL LLALKQEHGI LLVEHDMDAV FALADQLTVM VNGQVIASGT PAQIRADAGV QAAYLGEEHA
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