Gene Bpro_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_2964 
Symbol 
ID4014383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3126147 
End bp3127310 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content58% 
IMG OID637942627 
Productphage integrase 
Protein accessionYP_549776 
Protein GI91788824 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.187641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA AATTCAGATT CACAAAGCCC CGAATCGAAG CATTACCCCC TGCCCTACCT 
GGTAAGCGCG ACGAATACCG GGACGAGGCT TTGCCCGGCT TATGGCTACG CGTCAGCTCG
GCAGGCGTGA AAACCTATGC GGTATTGGCT CGAAAGAAAG GCGGCGCATT GGAGCGCGTG
ACTATTGGCA CGGCCGACAA GCTGACGCCC GAAAACGCCC GCGATAAAGC GAAGAAAATC
ATTGCCGACC TGGCGACCGG CGTAAGCCAC GCGGCATCGG CCCGGGCAAA GCGCGGCGAG
ACAACCTTTG CCGAATTGTT GACCGACTAC CTGAGCAACA CCACCATGAA GCCGCGAAGC
CTTGAGGCGT ATCAGTGGCT CTACAAAAAG CACGTCGAGG CCGACTTAGG CAAACGCAAG
TTGTCCGATG TTAGCGTTGA GCGGATTCGG GCCCTTCACA AGAAAATCTC CAAGGACACC
CCCACCACGG CAAACCGCTG CGTTTCAATG GTCAAGGCTG CGTTCAACTG GGCCCTGAAG
GAAGGCACCT ACACGGGCGC AAACCCTGCC GGCCACGTCA AGAAAAATAC CGAGACTTCC
CGCACGCGGT ATCTGCAGCC GGCAGAGCTG GCGATATTCT TTCAGGCGCT GGAAGAGTCA
GAGGAGCCTG CGAAAAGCTT TTTTATGCTG TGTCTGCTGA CCGGCGCGCG GCGCGCCAAC
GTGCTCGCGA TGCGCTGGGC CGATATCAGC CTGGAGGATG GAATATGGCG TATTCCTGCA
GGCGATGCGA AGGCCGGCGA AGAAATGAAT ATCCCGCTAG TTCCCGAAGC CGTAACGCTA
CTCACAAGGC TAAAAATCGA GGTAGCCGAC ACGTCGCCCT GGGTGTTCCC TGCTGACAGC
AAAACGGGCC ATTACCAAGA GCCGAAACGA GCTTGGGCAA CCCTGCGCCG CCGTTCTGGA
TTAGCGGATT TACGCATTCA CGACTTGCGG CGAACAATGG GATCCTGGCT TGTCAGGACG
GGTGCCAATA CCGCGATTAA CGCCAAGGCA CTCGGCCACA AGTCCATGCA AGCCGCTGCT
GTGTATCAGC GTATTGCAGA CGTTGACCCG GTTCGCGACG CAATGGAAAA GGCCACCACA
GCATTCATGG GAGGCAAGCG ATGA
 
Protein sequence
MSEKFRFTKP RIEALPPALP GKRDEYRDEA LPGLWLRVSS AGVKTYAVLA RKKGGALERV 
TIGTADKLTP ENARDKAKKI IADLATGVSH AASARAKRGE TTFAELLTDY LSNTTMKPRS
LEAYQWLYKK HVEADLGKRK LSDVSVERIR ALHKKISKDT PTTANRCVSM VKAAFNWALK
EGTYTGANPA GHVKKNTETS RTRYLQPAEL AIFFQALEES EEPAKSFFML CLLTGARRAN
VLAMRWADIS LEDGIWRIPA GDAKAGEEMN IPLVPEAVTL LTRLKIEVAD TSPWVFPADS
KTGHYQEPKR AWATLRRRSG LADLRIHDLR RTMGSWLVRT GANTAINAKA LGHKSMQAAA
VYQRIADVDP VRDAMEKATT AFMGGKR