| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2880 |
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| Symbol | |
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| ID | 4014455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3041645 |
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| End bp | 3042820 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637942544 |
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| Product | putative type 4 fimbrial biogenesis pilw-related protein transmembrane |
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| Protein accession | YP_549693 |
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| Protein GI | 91788741 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.403478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA CCCTCCGCAC GCAGCGCGGC TTCACTTTGG TGGAGTTGAT GATTTCGCTG
GTCCTCGGAT TGCTGATCAT CCTGGCTCTC CTCACCATGC TGATCAACGT CAATCGCAAC
AACAGCGAAC TGAGCTCCAC GAACCGGCTC ATCGAGAACG GACGCTTTGC CGTGCAGCTG
CTGTCGTCCG ACGTGGCGCA TGCGGGCTAC TGGTCCGGCC ATGTTCCCGA GTTCGACAAT
TTGACGGGCT CGACCACCGT CGGGCCGACG GACGTGCCGA CAGCCGTGCC CGATCCGTGT
CAGGCCTTCG CGGCGTGGGA CGCGGCGTAC AAGACCAACC TGATCGGTAT GGCGGTGCAA
GGAACCGACA TCCTGGACGT GTCATCCCCG TCGGCGCCGG TCTGCGCCGG CGTTGTTACA
AATCCCCAGC GAAATACTGA CCTACTTGTG GTGCGCCATG CGGAACCATG CCTCGTCGGC
TCGGGTACGG ACGACTGTTC TGACACCCGT GCCGCCACCT CACCGCATGT GTATGTTCAG
GCGTCCCGGT GCGGGGACGA CACCACGACT CTTGTGCTGG GCACCACTGG CTTCACCTTG
AAGGCGGGCG ACTGTACCGC GGATGCCCCC ATCAGGCGGT TCTCCTCCAG CATCTACTAC
GTACGCGATC ACGCCAACGC GGCGGGAGAC GGCATACCGA CACTGATGCG CGCGCGTTTT
GGTGTCAACG GTACCCCGCA ATTCCTGTCC GCCCAGGCGC TGGTGGAGGG GGTACAGGGC
TTCAGGGTGG AATATGGAGT GGACAACAGG AGCGACACCG CCGCCACGGT CGACCTGGCG
GCGCTGGCCT TGCCGATCGC GTGGCCGACA GGCGCCACCG TGCTGAACAC CCCCACGAAT
CGCGGCAATG GTCTGCCGGA CGAATACATC CGCTGCTCGC AAGCAACGCC CTGTACTGCG
GATCAGCTGG TGAACGTGAC GGTGGTCAAG CTGTACGTGC TGGTGCGAGC GGAAAGGACC
ACGCCAGGCC ATACGGACAC CAAGCAATAC TGCCTGGCCA GTTCCTGTAC CAATCCGACG
GACTACATGG GCCCGTTCAA CGACGGCTAC AAGCGCCACC TGTTTACCCA GACCATCCGC
TTGACCAACG TAGCCACGCG CAGGGAGACG CCATGA
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| Protein sequence | MNKTLRTQRG FTLVELMISL VLGLLIILAL LTMLINVNRN NSELSSTNRL IENGRFAVQL
LSSDVAHAGY WSGHVPEFDN LTGSTTVGPT DVPTAVPDPC QAFAAWDAAY KTNLIGMAVQ
GTDILDVSSP SAPVCAGVVT NPQRNTDLLV VRHAEPCLVG SGTDDCSDTR AATSPHVYVQ
ASRCGDDTTT LVLGTTGFTL KAGDCTADAP IRRFSSSIYY VRDHANAAGD GIPTLMRARF
GVNGTPQFLS AQALVEGVQG FRVEYGVDNR SDTAATVDLA ALALPIAWPT GATVLNTPTN
RGNGLPDEYI RCSQATPCTA DQLVNVTVVK LYVLVRAERT TPGHTDTKQY CLASSCTNPT
DYMGPFNDGY KRHLFTQTIR LTNVATRRET P
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