| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2873 |
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| Symbol | |
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| ID | 4014448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3033833 |
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| End bp | 3034723 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637942537 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_549686 |
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| Protein GI | 91788734 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.113557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.33639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGC TAGGAAACCA TGGCTTGATG CCGCACCTTG AGGCGCACTT TAAAAGTGTA
CGCAGCAGTC TTTCAAATAT TGCTGACGAT ATTGCCCAGG GCTTTTTCGA GATCATCCAC
AACAGCTTTG CCCTCCTGGG GCTGGCCGTC GTGTTTGCGG TGATCACCCT TGTCGCCCGA
CCCGATTTGC GTCAGGCGGG TGAATCCGAG CTGATCACCT GGCTGCAGGA GCGCCGGGAG
GCGGCGATCG GCTTTACCGA GCCCGCCGCC ATTGACCGGG CCACCGCGTC CAACCCGAAA
GACCTGCCAT CCCAACAGGC AGCCGTGGCT TACTGGCTGA GCAAAAAGTA CGGCGTGGCA
CCGGAGCCTC TGAGCGTTCT GGTGTCAGAG GCATTCGAGA TTGGCCAGAA AGCCAAGCTC
GACCCCACCC TGATTCTGGC CATCATGGCA ATCGAGTCGG GTTTCAACCC CTTTGCTCAA
AGCCCGGTCG GCGCGCAGGG CTTGATGCAG GTGATGACCA AGGTGCATCA CGACAAGTAT
GAAAACTTTG GCGGCAAACT GGCGGCGTTT GACCCGGTGA CCAACCTTCG TGTCGGTGTC
AAGGTGCTGC AGGAGTGCAT TGCCCGGGCC GGCTCCATCG AGGGAGGTCT GAAATATTAC
GTGGGCGCGG CGAACATGGA AGATGATGGC GGTTACGCCG GAAAAGTCAT GGCCGAGCAC
GCTCGCCTGC TGACCGTGGT GGGGAGCAAG CGCCTTCTGC CCTCGCCGTT CTTCGCCAAT
CCGGCTCCGG CCCGCCCTAT CCCGGCGTCC TTGCCGGCAA AACCTGGCGC CGGGGACGCT
GGCGACGGCA GCAAAATGCC TGAAAAGGTA GCCTTCCTCA GTCAGTCCTG A
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| Protein sequence | MTALGNHGLM PHLEAHFKSV RSSLSNIADD IAQGFFEIIH NSFALLGLAV VFAVITLVAR
PDLRQAGESE LITWLQERRE AAIGFTEPAA IDRATASNPK DLPSQQAAVA YWLSKKYGVA
PEPLSVLVSE AFEIGQKAKL DPTLILAIMA IESGFNPFAQ SPVGAQGLMQ VMTKVHHDKY
ENFGGKLAAF DPVTNLRVGV KVLQECIARA GSIEGGLKYY VGAANMEDDG GYAGKVMAEH
ARLLTVVGSK RLLPSPFFAN PAPARPIPAS LPAKPGAGDA GDGSKMPEKV AFLSQS
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