Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2665 |
Symbol | |
ID | 4014658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2800529 |
End bp | 2801005 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637942327 |
Product | endoribonuclease L-PSP |
Protein accession | YP_549479 |
Protein GI | 91788527 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0119908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACT CACGCGAAAC CAGGTTCGCC GCCGCAGCAG CCGCACTCGG CTACAACTTC GACGGTGAAA TCAAAATCGG CGGAAATTAC GTCCCCGTCG TGCAACACGG CGACCAGGTC TACGTCAGCG GCCAGATCCC GCGCGTCGGA AATACCGTGG TCGTCACGGG CCGCGTCGGA ACGGAAGTTT CAGTTCCTCA GGCCCAGCTG GCTGCCAAGG TCTGTGCCAT GCGCGCGCTC GCACTGCTGC GGCAAAGCCT CGGAAGCCTG GAGCGGGTGA AACACATTCT TCGCATGACG GTCTACGTGC AATCGGCTCA AGACTTCACT CAGCAAAGCG AGGTCGCCGA TGCCGCGTCA GCGGTGTTGT ATGCCGTTCT GGGCCCTGCC GGCATTCACA CGCGCACCTC GGTTGGCGTT GTCCAGCTCC CCAAGAACGC GTCCGTCGAG CTTGACCTCA TTGCCGCAGC AGGGTAG
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Protein sequence | MEDSRETRFA AAAAALGYNF DGEIKIGGNY VPVVQHGDQV YVSGQIPRVG NTVVVTGRVG TEVSVPQAQL AAKVCAMRAL ALLRQSLGSL ERVKHILRMT VYVQSAQDFT QQSEVADAAS AVLYAVLGPA GIHTRTSVGV VQLPKNASVE LDLIAAAG
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