| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2615 |
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| Symbol | |
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| ID | 4014725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2745945 |
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| End bp | 2746979 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637942277 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_549429 |
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| Protein GI | 91788477 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0357699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.629555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT CTGAACAAAG CAAATTGATT ATATCGGGCG CTGTTGCGGC CAATAGCCCC
TCTGATGAGG CTCAGGATGA AGCTGACAGC AGTGTCGAGC TGGAGTTACG GCGGGTGATG
GTTCCCGCGG GGAGTCATGG CGCACGCCTT GACCGGGCCT TGGCCGGCAT TGTGCCTGAG
TTCTCCCGCA GCTATCTGCA ACAGCTGATC GAAGCAGCCG TGGTGCAGCT CAATGGCCGG
GCAGTCACCA AGCCGTCGGC CAAGGTCAAG GCCGGCGATG AGCTCATCAT AGAGTTGCGG
CCCACACCTC AAAGCCAGGC CTTCAAGCCG GAAGCCATGG CGCTGGACAT TGTGTTTGAG
GATCCCTATC TGCTGGTAAT CGACAAACCG GCCGGCCTGG TTGTGCACCC CGCACCCGGT
AACTGGAGCG GCACCCTGCT CAATGGCTTG CTGGCGCGTG ATCCCCAGGC GTCCTTTTTG
CCGCGCGCCG GCATCGTGCA TCGTCTCGAC AAGGATACCA GCGGGCTGAT GGTGGTCGCC
CGCCAGCGAC AGGCGATGGA TCAGCTGGTG AGCATGATCG CCGCCCGGAG CGTGAGCCGG
GAATATATTG CGCTGGCCCA CGGTGCATGG CAGGGGGCAC GGACCCGGGA GGTGAGCGCG
GCCATCGGCC GGGATCCCCG CAACCGCCTG CGCATGGCCG CCGTTGACCT GGAAAAAAAC
GCCGGCAAGC CGGCCTTGAC GGTGATATCC CTGCTGCAAA ACGGCGAGCG GCATTGTCTG
GTCAAGTGCA AGCTGCATAC CGGCCGCACC CATCAAATTC GCGTGCACAT GGCGCTTCTG
GGTCACCCCT TGATATCCGA CGGGTTGTAC GGCGGGGCAG TTGCTGCGGG GTTGGAGCGC
CAGGCGCTGC ATGCCTGCCG GCTGGCATTT GAACATCCCG TGACCGGTGC CCCGATGGAA
TTCAGGTCGC CGCCGCCGCC TGATTTACGG GCGGCTATAG CGGATGTCGG CCTGATATAC
AATCAAAGTT CGTAG
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| Protein sequence | MTDSEQSKLI ISGAVAANSP SDEAQDEADS SVELELRRVM VPAGSHGARL DRALAGIVPE
FSRSYLQQLI EAAVVQLNGR AVTKPSAKVK AGDELIIELR PTPQSQAFKP EAMALDIVFE
DPYLLVIDKP AGLVVHPAPG NWSGTLLNGL LARDPQASFL PRAGIVHRLD KDTSGLMVVA
RQRQAMDQLV SMIAARSVSR EYIALAHGAW QGARTREVSA AIGRDPRNRL RMAAVDLEKN
AGKPALTVIS LLQNGERHCL VKCKLHTGRT HQIRVHMALL GHPLISDGLY GGAVAAGLER
QALHACRLAF EHPVTGAPME FRSPPPPDLR AAIADVGLIY NQSS
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