| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2558 |
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| Symbol | |
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| ID | 4014785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 2679344 |
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| End bp | 2680669 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637942220 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_549372 |
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| Protein GI | 91788420 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.351489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACAC TCCGCCCGAT CGTGATTGCC TTGGGTGCCG GCCTGTTGCA GGCCTGCGTG
GCGCCCCCTA CGCAGAAGGA ACTCGCCATG CAGCCCGTGT TGCGGGTGCG CCATTCGGCC
GACCAGACGG CTGCGACCTA TTACCAGCTC GGCAAATACC ACCAGGAGCG CGGCAATGTC
GATCTTGCGC GCGCCGCCTA TGCTTATTCG GTAGAACTGG ATGGCCGGCA ACTGGAAGCG
CGCAATGCGC TCGCCGCCAT TCACGCCCAG CAGGGCAGGC TTGAAGACGC CAAGGTGCTA
CTGCTTCAGC TTGTCGCCGA GTACCCGGCG GTTGCGCATC CGTACAACAA CCTTGGCTTT
GTTCACTATC TGCAGGGCAA TTACGATGCC GCCGTGGCTA CGCTACAGCG TGCGCTGGTG
CTGGATTCGG AAAACCAGCG GACCCGCAAC AATCTCCAGG CGGCAAAGGT GGAACTCGCA
AAACTTGGTG AGCGTCCTGC CGTTGCGCGG GCACCTGCGC CAGCGACGAT GGACACACAA
GGCGTCCTGC CAGGACAAGC CACGGCAACC ATCACTGAAA ATCGCAAGGA TGAGATGACG
GCAACGGCAA CGGCAGTCAG TACACCCGCC CCCGTACCCG CTCCCATACC CGTATCTGTG
CCCACAGTCG CGGTGCAGCG CCCTGCCGAA CTGGCTGTGT CGCCCGCGCC TGCACCACGA
ACGCAGGAAC TTGCGGTTGC GATTTCGCCC TCGGTGCCGC AAGCCCGCAT GGAGGTGGTG
CAGGTCGTGC CTAATGTGTT TGAACTCAGG CCCAAACCTG CTGTTGCCGC TGTTGCTGCT
GTTGCTGCTA TTGCCCCCAT CATTGCTGAC AGGCAACCCG AGAAAGCAGT TGTGGGAGCG
GCAACCCTTG TTCCCGTTCC TGCGCTTGCT GCTGCACGTG CTACAACTTC CCCCCCTTCT
GTCGCCGCCA CCAAAATGTC CAGAGTGGAA GTTTCCAACG GCAACGGCAT CACCGGCATG
GCCAAACGAA TCAAGGGTGT GCTTGGCAGG TACGGCATTG CCGTGAGCCG GCTGACCAAT
GACCGCCCTT TCAAGCAGCA GGACACGAAA ATACAGTACC GGGCTGGCTA CGAACAGGCC
GCAGAAAGCC TGAAACTTGC CCTGCGGGGC CATGCGGTGG TGGTGCCAGT CAATAAGCTG
TCGGGCAATA CCGATGTGCG ACTGGTACTG GGAAAAGACG CCGTCGCGCA CATGGCCCTG
ATTGAGGAAT GGGCCAGCCA GTCGCGTTTG GCGTCAAATG GGGAAGGCGA AATCAGCAAC
CATTGA
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| Protein sequence | MFTLRPIVIA LGAGLLQACV APPTQKELAM QPVLRVRHSA DQTAATYYQL GKYHQERGNV
DLARAAYAYS VELDGRQLEA RNALAAIHAQ QGRLEDAKVL LLQLVAEYPA VAHPYNNLGF
VHYLQGNYDA AVATLQRALV LDSENQRTRN NLQAAKVELA KLGERPAVAR APAPATMDTQ
GVLPGQATAT ITENRKDEMT ATATAVSTPA PVPAPIPVSV PTVAVQRPAE LAVSPAPAPR
TQELAVAISP SVPQARMEVV QVVPNVFELR PKPAVAAVAA VAAIAPIIAD RQPEKAVVGA
ATLVPVPALA AARATTSPPS VAATKMSRVE VSNGNGITGM AKRIKGVLGR YGIAVSRLTN
DRPFKQQDTK IQYRAGYEQA AESLKLALRG HAVVVPVNKL SGNTDVRLVL GKDAVAHMAL
IEEWASQSRL ASNGEGEISN H
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