Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2475 |
Symbol | |
ID | 4014858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2589191 |
End bp | 2589886 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637942139 |
Product | integrase catalytic subunit |
Protein accession | YP_549291 |
Protein GI | 91788339 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0180519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0292129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGAAGC GCTATCCGGT GAGCATCTCC TGTGAAGTGC TGCAAGTGAG TGCCAGCGGG TACTTCACCT GGCAACGCCA TCTGAATGGG AACCGATCTG CTCCACCAGG TCGCTATGGC GACGAGGCCT TGTTGGCCCA CATGCGAGCC ATCCATGCCG CGGTCAAACA GGAATACGGC TGGCCGCGCA TGCACAAGGA ACTTCTCGCC CGAGGTATTC GGGTGGGCAA GGAGCGCGTT CGGCGCCTGA TGCAGCAGCA CGGCATCAAG GCCAGGACCA AACGCAAGTT TGTGGTGACC ACCGACAGCA AACACAACCT GCCCGTGGCC CCCGACCTTG TACAGCGGCG TTTCACTCCT GAGGCGCCCA ACCAGCTCTG GAGTGGCGAC ATTACCTATA TCGCCACCGA TGCAGGCTGG GTGTACCTGG CGGCAGTCAT CGACCTGTTC AGTCGCCAGG TGGTGGGCTG GAGCCTGAAA CCCCACATGC AAACCAGTCT GGTCAAGGAT GCGTTGACCA TGGCGTGGTT TCGTCGGCGT CCAGACGCTG GCTTGATATT CCACAGCGAC CGAGGCAGCC AGTATTGCAG CCACGAATTC CAGGATGCAT TGAAAGATTG GAAGATGCGC TCATCGATGA GCAGGAAGGG CAATTGCTGG GATACTCCCC CACGGAGAGC TTCTGGGGAC GACTGA
|
Protein sequence | MRKRYPVSIS CEVLQVSASG YFTWQRHLNG NRSAPPGRYG DEALLAHMRA IHAAVKQEYG WPRMHKELLA RGIRVGKERV RRLMQQHGIK ARTKRKFVVT TDSKHNLPVA PDLVQRRFTP EAPNQLWSGD ITYIATDAGW VYLAAVIDLF SRQVVGWSLK PHMQTSLVKD ALTMAWFRRR PDAGLIFHSD RGSQYCSHEF QDALKDWKMR SSMSRKGNCW DTPPRRASGD D
|
| |