| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2207 |
|---|
| Symbol | |
|---|
| ID | 4015127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2304268 |
|---|
| End bp | 2304747 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637941878 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_549032 |
|---|
| Protein GI | 91788080 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT GGCCTAAAAA GGCTGCCGAC CTGATCGGCG GCGGGTTATT CCTGACTCTG
TTCATCGTGT TTGTGATCCA GGTCACGGCA CGCTTCGGGT TCAACAAACC GATGGCATGG
ACCGACGAAG CCGCCGTGAT CCTGTATGTC TGGGTCATTC TGTGGGCTGC TGCTTTTATC
GTGCCCGAGC GTGAACACGT GGTGTTCGAC CTGGTCTGGA ACAGCGTCAG CCGACGCGCC
CGGCAGGTGA TGCAGATCGC AGGCAACCTG ATGATTGGCG GGCTGGCGCT GTGCGGCATT
CCGGCCAGCT GGGACTATGT GCATTTCATG GCCCGGGAAG GAACACCCGT GCTGGGCCTG
TCCTTCATGT GGGTGTTTTT GCCTTTTGTG CTGCTGCTGG CGGCACTGGT TGTTCGCTCT
GCGTGGGCCA TCTGGAACGC GATTCGGGGT GTTGGTCTTG AAGCGGAGTT GCGCATATGA
|
|---|
| Protein sequence | MKTWPKKAAD LIGGGLFLTL FIVFVIQVTA RFGFNKPMAW TDEAAVILYV WVILWAAAFI
VPEREHVVFD LVWNSVSRRA RQVMQIAGNL MIGGLALCGI PASWDYVHFM AREGTPVLGL
SFMWVFLPFV LLLAALVVRS AWAIWNAIRG VGLEAELRI
|
|---|
| |