| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2195 |
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| Symbol | |
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| ID | 4015153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2290556 |
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| End bp | 2291458 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637941866 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_549020 |
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| Protein GI | 91788068 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00262069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAG CGCGCAATGC AAACCAGGTA ACCCCGGTAA CTCCGGATTT CTCGGGGCTC
TGGATCCCGC TTGTCACCCC TTTTGACCAC GGCCAGGTTG ACCATGCGTC CTTGAAGCGC
CTGGTGGCGC ACTACCGCGG CAGCGGCATT GCCGGCCTGG TGGCCTGCGG CTCCACGGGC
GAAGCAGCAG CCTTGAGCGA CGAAGAGCAG CTGGCCGTGC TGCAGGCCGT CATGCGGGAA
GCACCTGAAC TGCCGGTGGT CATGGGCCTG TCGGGCTACC ACCTGGGGAA AACCGCGGCG
CGCATCAAAG TGCTGGGCGA GCTGGGCATT GCCGGCATCC TGCTGCCCGC GCCCCACTAC
ATCCGGCCTG CCCAAGCCGG CCTGATCGAG TGGTTTACCC AGCTGGCCGA CGCCAGTGCC
GTGCCGGTCA TCCTGTATGA CATTCCCTAC CGCACCGGTG TGAAGATCGA ACTGGAGACC
CTGAGGGCGC TGGCCAGCCA TCCACGCATC TGCGCCATCA AGGACTGCGG TGGCGACGCA
GACAAAACGC AAGCGCTGAT CAGGGACGGC CGCCTGCAGG TCTTGTGCGG CGAGGATGGC
CATATTTTCT CCACCCTGGC GCAAGGCGGC CATGGTGCGA TTGCGGCGGC GGCCCATGTG
CACACGCGGC GTTTCGTCCA GGGGATGGAT CTCATCAGGA CCGGCGATGA GGCGCAGGCC
CGCACGCTGT GGGAGCCGCT GCTGCCGCTG ATTGAAGGCT TGTTCGCCGA ACCCAGCCCA
GGCCCGCTGA AAGCCCTGCT CGCGCGCCGG GGACTGGTTC GCGAAGAACT TCGCAGCCCC
ATGACCCCGG CCTCTGGCGC GCTGGTTGAA CGCCTGCAGC GGCTGGATGG GTTGATCGGG
TAA
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| Protein sequence | MQTARNANQV TPVTPDFSGL WIPLVTPFDH GQVDHASLKR LVAHYRGSGI AGLVACGSTG
EAAALSDEEQ LAVLQAVMRE APELPVVMGL SGYHLGKTAA RIKVLGELGI AGILLPAPHY
IRPAQAGLIE WFTQLADASA VPVILYDIPY RTGVKIELET LRALASHPRI CAIKDCGGDA
DKTQALIRDG RLQVLCGEDG HIFSTLAQGG HGAIAAAAHV HTRRFVQGMD LIRTGDEAQA
RTLWEPLLPL IEGLFAEPSP GPLKALLARR GLVREELRSP MTPASGALVE RLQRLDGLIG
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