| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2125 |
|---|
| Symbol | |
|---|
| ID | 4015236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 2215770 |
|---|
| End bp | 2216864 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637941795 |
|---|
| Product | gentisate 1,2-dioxygenase |
|---|
| Protein accession | YP_548950 |
|---|
| Protein GI | 91787998 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
|---|
| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGA CACCTCCCCC CAAACCAGGC CAGCCGGCCC GCGCCGACAA CGCGGCGCGC
AAGGCCTTCT ATGACGCCAT CTCGTCCCAC AGCATGACGC CGCTGTGGGA GGTGCTGCAC
GCGCTGGTGC CACCGTCCCC CACGACGCCA TGCCAGCCCG CGCTCTGGAA ATACGCCGAG
GTACACCCGT TCCTGATGCA GGCGGGCCAG CTTATCACCG CCGAAGAGGC GGTGCGCCGG
GTGCTGATCC TGGAAAACCC CGGCCTGCGC GGGCAGTCTT GCGTGACCCA GTCGCTTTAT
GCCGGCCTGC AGGTCATCAT GCCGGGCGAA GTCGCGCCCA GCCACCGGCA CACGCAAAGC
GCACTGCGCT TTGTCGTCGA AGGCCAGGGC GCCTACACCG CGGTAGACGG CGAGCGCACA
CAGATGAAGC CAGGCGATTT CATCATCACC CCGAGCTGGA CATGGCACGA CCATGGCCAC
CCCGGCCATG TGGAATCGGA TGCACCCGTG GTCTGGCTGG ATGGCCTGGA CATCCCCATG
CTGCGCTTCT TTGACGCCGG CTTTGCGGAA AACGGCAGCG CCAAACAGCA AGCCGTGACC
AAGGCTGAAG GCATCAGCTA CCAGCGCTAC GGCGCCAACA TGCTGCCGGT GCGCTACGAC
GCGCCCTTTG GCCAGACCTC TCCGATCTTC AGCTACCCCT ATGAGCGCAC ACGCGAGGCC
CTGCACCAGC TGGAAGCCCA TGCCGAGATC GATGCCTGGG ACGGCACCAA GCTGCGCTAT
GTCAATCCGG CCACGGGCGG CTCGCCCATG CCGACCATGG CCACCTTCAT GCAGCGCCTG
CCGGCGGGCT TTGAAGGCAA GCCCTGGCGC CAGACCGATG GGGCCGTATT CAGCGTGGTG
GAAGGCCACG GCAGCGTCAC CATCGAGCGC AATGGCCAAT CCTGGACATT CGACTTTGGC
CCGCGCGACC ATTTTGTGAT TCCGTCGTGG CACACTGCCC AACTGCACTC GCAGCAAGGT
TGTGTGCTGT TCAGTTTTTC AGACCGCCCG GTGCATCAGG CCTTGGGCAT ACACAAAGAG
GAAAGGTTGT CATGA
|
|---|
| Protein sequence | MDMTPPPKPG QPARADNAAR KAFYDAISSH SMTPLWEVLH ALVPPSPTTP CQPALWKYAE
VHPFLMQAGQ LITAEEAVRR VLILENPGLR GQSCVTQSLY AGLQVIMPGE VAPSHRHTQS
ALRFVVEGQG AYTAVDGERT QMKPGDFIIT PSWTWHDHGH PGHVESDAPV VWLDGLDIPM
LRFFDAGFAE NGSAKQQAVT KAEGISYQRY GANMLPVRYD APFGQTSPIF SYPYERTREA
LHQLEAHAEI DAWDGTKLRY VNPATGGSPM PTMATFMQRL PAGFEGKPWR QTDGAVFSVV
EGHGSVTIER NGQSWTFDFG PRDHFVIPSW HTAQLHSQQG CVLFSFSDRP VHQALGIHKE
ERLS
|
|---|
| |