| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2100 |
|---|
| Symbol | |
|---|
| ID | 4015248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 2188330 |
|---|
| End bp | 2188836 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637941769 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_548925 |
|---|
| Protein GI | 91787973 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2105] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.077376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCAC AGCCTCTGCG TCATGTCTTT GTTTACGGCA CCCTGCGCCG GGGTGAAGAG
CGCGATATCA ATTGCCTGAA GCCTGCGCCG CGATGGGTGG GGCACGCGAG TGTGGCGGGC
ATCTTGCACC ATCTGGGCGC CTATCCTGGT CTGGTCCTGG GCGGTCAGGG CCTGGTTAGG
GGGGAGGTGT ATGAAATCAC GCCTGAGCTG GAACGGCAAC TCGATGAAAT CGAGGAGGTC
TGGCCCCAAC AGAGTGGCGA GTACATCCGG CGCGAGGTGC TGGTGGCGCT TGATCCCCCA
CCGGACCATC GACCGCCCGA TGAATTGGCG GATCAATCGA GCGATCAATT GGCCGATCAA
TCGGGGCATC ACCTGTCGCA GCCACGGCAA GACGGCCCGG GCACGGTGGT CTGCCTTCTT
TATGAAATTG CCCCCGGGCG CATCCATGGC AAGCCGGTGA TTGTGGGCGG CGACTGGACG
CAGGCCCGGG CTGAGCGCAA GCGCTGA
|
|---|
| Protein sequence | MSPQPLRHVF VYGTLRRGEE RDINCLKPAP RWVGHASVAG ILHHLGAYPG LVLGGQGLVR
GEVYEITPEL ERQLDEIEEV WPQQSGEYIR REVLVALDPP PDHRPPDELA DQSSDQLADQ
SGHHLSQPRQ DGPGTVVCLL YEIAPGRIHG KPVIVGGDWT QARAERKR
|
|---|
| |