| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1896 |
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| Symbol | |
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| ID | 4015455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1959873 |
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| End bp | 1960655 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637941565 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_548727 |
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| Protein GI | 91787775 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.506281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACA GCATCGATCT TTCAGGACGT GTCGCGCTCG TGACCGGCGC TTCTGGCGGT
CTGGGCGCGC AGTTTGCCAA AACCCTGAGC CGTGCTGGCG CCGCCGTGGT GCTGGCAAGC
CGCAGCCTGG ACAAGGTCAA GGAGCTGCGC GCACAAATTG AGGCTGAGGG GGGCGATGCG
CATGTGGTGT CGCTCGATGT GATGGACCAC ACCAGCATCA AGGCCGGCGT CGCCCATGCC
GAGACCGAGG TAGGCCCCAT CGACGTTCTC GTCAACAACT CCGGCGTGAG CACCACGCAG
CGAATCCAGG ATGTGAGCGA AGAGGACTAT GACTTCATCT TCAACACCAA TGTGAAGGGG
GCGTTCTTCG TTGCGCAGGA AGTCGGCAAG CGCATGCTCG CCCGGGCCAG GGGAGAAGCC
CCGGGCACCT ATGGCGGCGG GCGCATCATC AACATCGCGT CCATGGCGGC CCTGCGGGTG
TTGCCGCAAA TCGGCGTGTA TTGCATGAGC AAGGCCGCGG TGGTGCAGAT GACCAAATCC
ATGGCGCTGG AGTGGGGCAA ATTCGGCATC AACGTCAATG CCATTTGCCC GGGCTACATC
GACACCGAAA TCAACCACCA TCACTGGGAA ACCGAGCAGG GCAAGAAGCT GGTCCAGATG
CTGCCGCGCA AGCGCATCGG CAAGCCGGAA GACCTGGACG CGCTGCTGGT GATGCTGGCC
AGCCGGGAAA GCCATTTCGT CAACGGAGCG GTGATTGCGG CAGATGACGG CTTTGCGACC
TGA
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| Protein sequence | MAYSIDLSGR VALVTGASGG LGAQFAKTLS RAGAAVVLAS RSLDKVKELR AQIEAEGGDA
HVVSLDVMDH TSIKAGVAHA ETEVGPIDVL VNNSGVSTTQ RIQDVSEEDY DFIFNTNVKG
AFFVAQEVGK RMLARARGEA PGTYGGGRII NIASMAALRV LPQIGVYCMS KAAVVQMTKS
MALEWGKFGI NVNAICPGYI DTEINHHHWE TEQGKKLVQM LPRKRIGKPE DLDALLVMLA
SRESHFVNGA VIAADDGFAT
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