| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1889 |
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| Symbol | |
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| ID | 4015448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1952287 |
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| End bp | 1953771 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637941558 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_548720 |
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| Protein GI | 91787768 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.818952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.88306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAG CCATTACCAT TGCCATCCTC GTCACCGGCG CCGTCCTGGC GGCGCTGTCC
GCGAGTGCGG GCATGGCGGG CGCCGTCCAA TTGACAGAGC GCCAGTCCCA CGGCTACATG
CATGTGATTT TCTATGCCAT GCTGCTGATG GTGGCAATGA GCAACCTGCT CTCCGGCCGC
GACCTGTCTG TCCATGCGCT GAGCCTGACC GAACCTGCCG TGCTGGTGCG CCACCCGCTG
GTGCGCCTGG CGCAACCCTT GATGTCGCTG CTGCTGCTGA CCATTGCAGG CGAGCGCATC
GTCACCCGCT TCCTCAATCG CGGAAAAGCT ACGCCGGCAC CGCCGGTGAT ACTGGTGTCC
TTCATTTTTT TCTGGGCCGC AACGGTAGCC GCCCCTGCCC TGCTCGGCGC GCACCCGCAC
CTGTCGCACG ACTACGTCTA CCCGCTGGTG ATAGGGATTG CCGCCATACT GATCACTGGC
ATGGAACGCG ATCTTGCCCT GAGGGCGGCG CGCAACGCGC TGCTGCTGTT CATGGCCGCC
GGCCTGCTCC TGATCCCGCT AAAGCCCAGC CTGGTGCTGG ACAGTTCCTA CACGCAGGGC
TTTCTGCCGG GCGTACCGCG CCTGGCGGGC CTCGCGGCGC ACGCGGTCTC CCTGGGCGTA
CTGGCCCAGC TCGGTTTGCT GTGCCTGCTC GCGCGCCCCT TCGAGCGCGC GTGGCTTACC
CGGCTGGCGT GGGCCCTCGG GTTGGCGGTG CTGCTGCTGG CCCAGTCAAA AACCGCGTGG
ATTGCGTTTG TGGTCTGTTC GCTCTGCCTC CTCGTCGTGC GGCAAGGCCC GTCCTTCTGG
CGCCGTGTTG GTGACCCCTT GCATCCCGAA GTAGGTGTCG TCTCCCTGCT GGTGTTCATG
GCCGGGGTCT CGGCCCTCGC CGTGTTGTTG ATGTTTGGTG AACTGGACGC CAGGCTCAGC
AGCTTTTTTG CCAGCGCCGA GGGGGCCCAG CTCGCCTCCC TGACGGGACG GGACCAAATA
TGGGCGATCG CCTACGAGGA GTGGCGCCGT AACCCCGTGT TCGGTTACGG GCCCACCTTA
TGGGACGCCA GCTTCCGGGC GAGCATCGGC ATGCCCAACG CGACGCACGC ACACAACCAG
TTCATGGATA CGCTGTCGCG CTCCGGCACG GTCGGGGCGA CGGCCCTGGT GCTTTATGCA
GTGATCCTGC TGGTGCTCTC GCTGCGCTAT GCACGCGCCA GCGGCGGGCT CACGCTGGCG
CTATTCGTCG CCTTGGCCCT GCGAGCCATG AGCGAGGTCC CGCTGCTGCT GTTTGGCTAC
GGCCCCGAAC TGGTGACCCA TGTGCTGCTG CTGATGACGC TGGCGGCCGC CGCCAACGAG
GCCCGCGTTG CCCGAGTTAC CAAAGTACAA GCGGCGCGCA GCCGTGCGCA TGCAGGTTTT
TCCACCGCCA AAGACGGGTT GGCTTCCGCC CGCGCCAGAC CATGA
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| Protein sequence | MEQAITIAIL VTGAVLAALS ASAGMAGAVQ LTERQSHGYM HVIFYAMLLM VAMSNLLSGR
DLSVHALSLT EPAVLVRHPL VRLAQPLMSL LLLTIAGERI VTRFLNRGKA TPAPPVILVS
FIFFWAATVA APALLGAHPH LSHDYVYPLV IGIAAILITG MERDLALRAA RNALLLFMAA
GLLLIPLKPS LVLDSSYTQG FLPGVPRLAG LAAHAVSLGV LAQLGLLCLL ARPFERAWLT
RLAWALGLAV LLLAQSKTAW IAFVVCSLCL LVVRQGPSFW RRVGDPLHPE VGVVSLLVFM
AGVSALAVLL MFGELDARLS SFFASAEGAQ LASLTGRDQI WAIAYEEWRR NPVFGYGPTL
WDASFRASIG MPNATHAHNQ FMDTLSRSGT VGATALVLYA VILLVLSLRY ARASGGLTLA
LFVALALRAM SEVPLLLFGY GPELVTHVLL LMTLAAAANE ARVARVTKVQ AARSRAHAGF
STAKDGLASA RARP
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