| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1884 |
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| Symbol | |
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| ID | 4015481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1946241 |
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| End bp | 1947929 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637941553 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_548715 |
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| Protein GI | 91787763 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.597244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTTG ATGCCAACAG CATCCAGAAC GGCGCCGAGC TGCAGGCCGA TGTCTGCGTG
GTGGGCGGAG GCCCGGCGGG CATTGCGCTC ACGCTGTCCC TGTCGGAGCG CGGCCTCTCG
GTGCTGATGC TGGAGTCCGG GCAACTGCAG GAAGACGCCA AAACCCAGTC GCTCTATGAG
GGCGAGGTCG CCGATGAGCG ATTGCACAGC CCGCCCGACA AGTACCGGCA GCGGCGCCTG
GGCGGGTCGT CGGCGATCTG GGGTGGCCGT TGCATGCCGT TTGATCCCAT CGACTTTGAA
ACCCGCAACC ATGTGCCGAA CAGCGGATGG CCGCTGTCGT ATGACGACCT GCTGCCCTAT
TACCCGCAGG CCAACGCGCT GGCAGAAGCC GGGCGTTTCA GCTATGACGC CGGCGAAGCC
TTCGGCCCGC AGCTGGAGCC GCTGATCCGC GGCTTCGACA GCCCGCGCGT GCGCACCTGC
GGGCTCGAGC GGTTTTCCTG CCCGACCCAC TTCGGCACCC GTTACGCCAA GCGGCTGCAA
CTGGCGCCTG GCGTGCAGGT CCTGCTCGGT GCCAATTGCA CCGCCGTCCG GCTGCAGGCC
GACGGGCAGG CGGTGCGCAC GCTGGAAGTT GCCACCCTGG CCGGCAAGCG CTTTACCGTC
ACGCCGCGCG CGGCGGTGCT GGCCGCCGGC GGCCTTGAAA CCGCGCGCCT GCTGCTGGCC
TCGCGTGACG TCACACCGGC AGGCGTGGGC AACTTCCACG ACGTGGTCGG CCGCTATTAC
ATGTGCCACA TCGCGGGCAA CGTCGGCACC CTGACCGTCC AGGGCCCGAC CCGCAACGTG
CGGCACGGCT ACGAGGTGGC GCCGGAGGGT ATTTACTGCC GCCGGCGGCT GTCGGTGACA
GCGGCCGAGC AGCGGCGGCT GGGGCTGGCG AACGCGGTCG CGCGCCTGCA CTTTCCGCGC
ATCACCGACC CGGCACACCG CAACGGCGTG CTGTCCGGCT TGTTTCTGGC ACGCCGGCTG
ATCAGCTATG AATACGGCAA ACGGCTGAAC GACGGCAACG CCACCTCGCC GGGGCACTAT
GCCCGCCATC TCTTCAATGT GGTGGCCGAC CCGATGGACA CCACGGCATT CCTGGGTCAC
TGGCTGCTGC GACGCTCGCT CGCCGAGCGC AAATTCCCGT CGGTGATCCT GCGCAACCGC
ACCAACCGCT TCAGCCTGGA GGTGCACGGC GAGCAGATGC CGCAAGCCGG CAGCCGCGTG
ACGCTGACCG ACAAGCTCGA TGCCCTCGGC ATGCCGCAGC TGCGCGTGGA CTGGCGCTAC
AGCCAGGCGG ACATTGATTC GGTCCGCGGC ACACTGGACG TGCTGGTGCA GGAGTTTGCG
CAAAGCGGAG TTGCCAGCTT TGACTACAAC CGCGACACAC TGGAGGAAGA CATCATGCGC
TTCGGCGCCT ATGGCGGTCA CCACATCGGT ACGGCACGCA TGGGCCTCGA TCCACGCACC
AGCGTGGTCG ACGCCGATTG CCGGGTGCAT TCGGTACGCA ACCTGTTCGT GGCGGGCAGC
GCCGTGTTCC CCACCTCCAG CCAGGCCAAC CCCACGCTCA CCCTGATTGC GATGTCGCTC
AGGCTGGGCG AGCACCTGGC GCGGCGCCTG CACACAGAGC ATGCCGCGCC CGTGGGAGCG
TGCGCATGA
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| Protein sequence | MILDANSIQN GAELQADVCV VGGGPAGIAL TLSLSERGLS VLMLESGQLQ EDAKTQSLYE
GEVADERLHS PPDKYRQRRL GGSSAIWGGR CMPFDPIDFE TRNHVPNSGW PLSYDDLLPY
YPQANALAEA GRFSYDAGEA FGPQLEPLIR GFDSPRVRTC GLERFSCPTH FGTRYAKRLQ
LAPGVQVLLG ANCTAVRLQA DGQAVRTLEV ATLAGKRFTV TPRAAVLAAG GLETARLLLA
SRDVTPAGVG NFHDVVGRYY MCHIAGNVGT LTVQGPTRNV RHGYEVAPEG IYCRRRLSVT
AAEQRRLGLA NAVARLHFPR ITDPAHRNGV LSGLFLARRL ISYEYGKRLN DGNATSPGHY
ARHLFNVVAD PMDTTAFLGH WLLRRSLAER KFPSVILRNR TNRFSLEVHG EQMPQAGSRV
TLTDKLDALG MPQLRVDWRY SQADIDSVRG TLDVLVQEFA QSGVASFDYN RDTLEEDIMR
FGAYGGHHIG TARMGLDPRT SVVDADCRVH SVRNLFVAGS AVFPTSSQAN PTLTLIAMSL
RLGEHLARRL HTEHAAPVGA CA
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