| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1847 |
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| Symbol | |
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| ID | 4015518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1908699 |
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| End bp | 1909676 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637941516 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_548678 |
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| Protein GI | 91787726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.127242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.110669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCCA CCATCCAGGG CAGCACCGAT GTTTATTTGA TCTCCGGCGA TCCGGTGGAG
CAGGTGCGTG CGCCCGAGGT GTTCAACCTG ATCTTCAGGA CGCTGGGTAT CAACGCGGTG
CTGGTACCTG TGCATGTGCC CCTCCAGGAC ATCGAGGCTT TCGTGCGCAC CGCTTTCCTG
GCCAAAAACA TCAAGGGCAT GCTGCTGACC ATTCCGCACA AATCGCGGGT GATGGGCCTG
CTTGCGCGTT GCAACGACGC TGGTCGCGTG GCGGGCGCGG TGAACGGCAT ACGCCGCAAC
GCAGCGGGCG AGCTGGAAGG CGCGCTGTTC GACGGCAAGG GTTTTGTCTT GTCGCTGGAC
TACTTCGGGG TGGCCTACGC CGGCAAGCGC GTGCTGATCC TGGGCGCCGG TGGCGCAGCT
GCCGCCATTG CCGTCTCGCT GGCGATGGCG GGTAGCCGCG CACCTGCCGG GATTGCACTC
TATGACCCGG CACCTGGCAA GGCGCAGGCC CTGGCAAGCC AGCTTGCTGC GGCGGCGCAG
ACGCCCCTGA AAAAGGTTGT GGCCGCGACC AGCAGCGACC CGTCGGCTTA TGACCTGGTG
GTGAACGCGT CACCGCTGGG GCTCAGGGCT GGCGATCCGC TGCCGTGCGA TGTGTCGCGG
CTGGCTCCGC ATGCGGCCGT GGTGGACATC CTGATGAAGA ACCAGCCGAC ACCGCTGGTC
CAGGCTGCCC GGGCACGGCA TCTGGTCGCA CAGCCCGGCT TTGAAATGCT GATCCAGCAA
GCACCGGATT ACCTGGCTTT TTTTGGCTAC GCCGAGGCGG CGCAAGCCGT TCGCAACAAC
GCCACCTTTA TTCGCGAACT TCTGTATCCG GCCGCCATGC AGGGTGAGAT CAACCGCCCA
GGCCAGCGCA TCCCCAGCTC CGAATTTGCC AGCGTTCCAG TCCCGGGAGT CGGGGAATCA
CGACTCCCGG CCCATTGA
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| Protein sequence | MHSTIQGSTD VYLISGDPVE QVRAPEVFNL IFRTLGINAV LVPVHVPLQD IEAFVRTAFL
AKNIKGMLLT IPHKSRVMGL LARCNDAGRV AGAVNGIRRN AAGELEGALF DGKGFVLSLD
YFGVAYAGKR VLILGAGGAA AAIAVSLAMA GSRAPAGIAL YDPAPGKAQA LASQLAAAAQ
TPLKKVVAAT SSDPSAYDLV VNASPLGLRA GDPLPCDVSR LAPHAAVVDI LMKNQPTPLV
QAARARHLVA QPGFEMLIQQ APDYLAFFGY AEAAQAVRNN ATFIRELLYP AAMQGEINRP
GQRIPSSEFA SVPVPGVGES RLPAH
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