| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1775 |
|---|
| Symbol | |
|---|
| ID | 4015560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 1833762 |
|---|
| End bp | 1834676 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637941447 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_548609 |
|---|
| Protein GI | 91787657 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0671659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCC GGTTTGTTGA AGCTTTCTAC TGGGTGGCAT CACTGAAAAG CATCTCGCGG
GCGGCTGAAA AGCTGTACCT GACGCAGTCC GCCATGTCCA GCCGCATCGC CACGCTGGAA
GAAGAACTGG GCATCCTGCT ACTGGACCGG CGCGACAAGC AGTTCAAGCT CACGGTGGCC
GGTGCCCGTT TTCTGGTTTA TGCGCAAAAG CTGCTGGAAC TGCAGCGCGA AGTCAAAGCC
GAGATGGGGT CGGGGCAGGC CATGGCGATG TCCATGCGCA TTGGCGCGAT CGAGTCGGTG
CTGCACTCCT GGCTGATTCC CTGGCTGGAA AAGCTGCGTG CCGACTACCC GGGGCTGGAA
CTGGAACTGA CGGTGGAAAC CACGCCGATC CTGATCGACC AGATCCAGCG CGGCACGCTG
GACCTGGTCT TTGCGGTGTT GCCCGCGTCG GCCGAGGGCG TGCGAAGCCA GGCCTTGCCA
TCCATGGACA TGGCGTTTGT CGGGCACCCG GACCTGCACA AAAAAAGAAT TTACAAACTC
GATGAGCTGG CCGGGATGGA GTTGTTGACC TTCCAGAAAG GCTCCCAGCC GCATGTCACG
CTGCTTGATT TGTTCAGGCA GCGCCGCATG GAACCCAAAA AGGTGCACGC CATTTCCTCA
ATTTCGGCGA TGGTTCAGCT GGTGCAGGGC GGCTTCGGGG TGGCCTTGTT GCCGCGCGCC
GCGGTAGAGC GGCTCACCGG CTTTGCGCGC CTGAAGCTGC TGACCTGCGA CGCCAAGTTG
CAGTCCTTGC CGATCAACGC CAGTTACCGC ACCGACCCCA GTTCCAGGAC TGTGGAGACC
GTTGTGCAGT CGGCCATTGC TTTCGCCGGA GGCCGCAACA ACGCACCAAA AAGGCGACTA
AAGGTAAACC CTTGA
|
|---|
| Protein sequence | MNLRFVEAFY WVASLKSISR AAEKLYLTQS AMSSRIATLE EELGILLLDR RDKQFKLTVA
GARFLVYAQK LLELQREVKA EMGSGQAMAM SMRIGAIESV LHSWLIPWLE KLRADYPGLE
LELTVETTPI LIDQIQRGTL DLVFAVLPAS AEGVRSQALP SMDMAFVGHP DLHKKRIYKL
DELAGMELLT FQKGSQPHVT LLDLFRQRRM EPKKVHAISS ISAMVQLVQG GFGVALLPRA
AVERLTGFAR LKLLTCDAKL QSLPINASYR TDPSSRTVET VVQSAIAFAG GRNNAPKRRL
KVNP
|
|---|
| |