| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1706 |
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| Symbol | |
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| ID | 4015647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1758797 |
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| End bp | 1760989 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637941378 |
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| Product | putative ATP-dependent exoDNAse (exonuclease V), alpha subunit |
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| Protein accession | YP_548540 |
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| Protein GI | 91787588 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.129548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTGC CAAGTGTCAC CGTGCGTATC AGTGCCGTGC GCAGCCAGAA CCCGTGTGGG
CGGGGTGGCG CGATCTTCAC GGGCATCGAG GTGGACGACA AAGGCTGGCG CGTCGATGCC
AAAACCCACT ACGTCATCAA AGCCTCCAGC CAATTGCTTC AGGCCCCGGT CGAATGCGGG
CAACTGTGGC GCATTGCCGG CACACCCGAG GCCAACACCA TAGTCGTCAA TGGCTACCGG
CTCACCGAAG CCACCATCAC GGCCGAATCC ATGGAAATGC TGCGCCCCTC GGGCGAGCAC
ATCATTACGC TGCTTGGTCA GGGCGAAGCC TTCGAGGGCA TCGGCGAAGT CAAGGCAAGG
CGCTTGTGGG AACACTTTGG CGATGCCTTG TACGACCTGC TCGACCGGTC GGACGTCGAC
CGACTCGCAG AGGTACTGCC CAGGCCGATG GCGCAAAAGC TCGCGGATGC ATGGCAGCAG
TGGGGCAACA CCTTTACCCT GCAATGGCTG CAGTCCAAGG GGTTTGCCGT AGCGCTCGGG
CGCAAGGTAC TGGACTTCTT CGGCAAGGAC GCCGCCCGCA AGATCGAGGA CGACCCCTAT
CGCCTGCTGA GCTTTGCCGC CAACTGGGCC ACCGTGGATG CCCTGGCGCA AGACACCTTC
GGCCTCAGTC CCACCGACCC GCGACGTCTC GCGGGCTCGG TCGAGGAAGC GCTGTACGCC
GCGTTTGACG CCGGCCACAC CTGCATCCCC GAGCTTGAGC TTGCGCGTCG CCTGCGCGTC
TTGTTGCAGC GAAGCGATGT GCTGGGGTCG GCACTGGCGC AAGCCGAATC AGCGGGGCGG
TTCATCCGCC ATGGCGAGCG ACTGCACGCG CCGGGCCCCT TTGTGATGGA GCAGGGCGTG
GCCCAAGCCA TCGCCCGCCG CGCCGCCAAT CCAGACCCCT TGCTCGACGC CGACTCACTG
GCGGAACTCA TCGCCGACTA TCAGGCACAA GCCGGCATCA GCTTGCATCA AAAGCAGGTC
GAGGCGCTGG AACTGGCGAA TGCCAACCCG TTCTGCGTCA TTACCGGGGG CGCCGGCACC
GGCAAGACCA CCGTGTTGCG CGGCTTGTTT CGCGTCTTTG AGGCGGCTGG CCACACGATC
TACCCCATGG CGCTCTCCGG GCGTGCCGCC AAGCGCATTG GCGAGGCCAC CGGCCATGGC
GCCCAAACCA TCGCCGGTTT CCTCAAGCAC TTCAATGCAG ATGATGCGCC TTCGAACGCG
GTGGTGGTGA TCGATGAGGC CTCGATGGTG GATTTGCCGT CCGCTTATCG GGTGATCCGG
CATCTGCCGC TCCACTACCG TGTGGTATTG GTCGGTGACC CGAACCAACT GCCACCGGTT
GGGCCAGGCT TGCTGCTGCA TGAACTGGCG CATCAACCCC AAGTTCCCGT CGTGGAACTC
TCGCAGGTCA AGCGCTATGG CGGGGCGATT GCCGAGGCCG CCGCCCTGAT CCGCGACGGC
GAGTGGCCCG ATTTGCCCGC CGACGCTCTC GCCGACATTG CCTTCCTGGC ATGTCCACCG
GATCAGATCA ACGAAGTCGT GCTGCGTCTG TACGACCAGG ATCGCAGTGC CAGTCAGATT
CTGTGCGCCA CGCGCAATGC CGCAGCCGGT GGCATGAATG CCATCAACGC GCTGTGCCAG
CGCCACACCA ACGCCCACGG TGAAGGGCTG ATGCACTGGA ACCTGGAATT CGACCAGCCG
CAAGGCACTG GTATACGCGT GGGCGATCCT GTCATCTGTC TGCGCAATGA CTGGGAGATC
GATTTGCAGA ACGGCTCACT CGGCGTCGTG CTGTCCGTGG AGCCACCCGT GCCGGACATT
GCGCCGGAGC GCCGCCTTGG GCGCATCCTG TGGGATGACG GACGCACGCG TGACCTGACC
CCTGAGTTGC TGGCGCATCT GGAACTGGCC TACGCCATCA CCATTCACAA GGCGCAGGGC
AGCGGCTTTC AGCGGGTCAT CATTCCTGTG CGCCAGAGCA AGCTGCTGGA TCGCACGCTG
CTGTACACCG CCGTGACGCG GGCAGAGCAA CAGGTGATTC TGGTCGGCGA CGTGGAAGCG
GCCAAAACAG CCATACGAGC GCCGCGCCAT TCGGATCGCC GGCATGTCGC GTTGGGCGCG
TTGCTGCGTG AGCAGTTCGA GAGGATGGTC TGA
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| Protein sequence | MNVPSVTVRI SAVRSQNPCG RGGAIFTGIE VDDKGWRVDA KTHYVIKASS QLLQAPVECG
QLWRIAGTPE ANTIVVNGYR LTEATITAES MEMLRPSGEH IITLLGQGEA FEGIGEVKAR
RLWEHFGDAL YDLLDRSDVD RLAEVLPRPM AQKLADAWQQ WGNTFTLQWL QSKGFAVALG
RKVLDFFGKD AARKIEDDPY RLLSFAANWA TVDALAQDTF GLSPTDPRRL AGSVEEALYA
AFDAGHTCIP ELELARRLRV LLQRSDVLGS ALAQAESAGR FIRHGERLHA PGPFVMEQGV
AQAIARRAAN PDPLLDADSL AELIADYQAQ AGISLHQKQV EALELANANP FCVITGGAGT
GKTTVLRGLF RVFEAAGHTI YPMALSGRAA KRIGEATGHG AQTIAGFLKH FNADDAPSNA
VVVIDEASMV DLPSAYRVIR HLPLHYRVVL VGDPNQLPPV GPGLLLHELA HQPQVPVVEL
SQVKRYGGAI AEAAALIRDG EWPDLPADAL ADIAFLACPP DQINEVVLRL YDQDRSASQI
LCATRNAAAG GMNAINALCQ RHTNAHGEGL MHWNLEFDQP QGTGIRVGDP VICLRNDWEI
DLQNGSLGVV LSVEPPVPDI APERRLGRIL WDDGRTRDLT PELLAHLELA YAITIHKAQG
SGFQRVIIPV RQSKLLDRTL LYTAVTRAEQ QVILVGDVEA AKTAIRAPRH SDRRHVALGA
LLREQFERMV
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