| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1470 |
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| Symbol | |
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| ID | 4012351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1521037 |
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| End bp | 1522632 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637941149 |
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| Product | regulator of RNA terminal phosphate cyclase |
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| Protein accession | YP_548316 |
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| Protein GI | 91787364 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA AAGTGGTGAT GGGTTTTCTG GGCACCCAGC TTGATTCGGG CCTGGGTTCG
GCGCGCTGGG AGAAGTGGCG GCCCACGGTG TCGATCGCGC AGCATGAAGA CCTGATCGTC
GACCGACTGG AGCTGATGCA CGACCTGCGC AACAAGCCGC TGGCCGAGCG GGTTCGTGAC
GACGTCGTTC AGCTCTCGCC CGGCACCGAG GTTCGCCTGA GCGAGATGAA CCTGGCCAAT
CCCTGGGATT TCGGCGAGGT CTATGGCGCG CTGTATGACT GGGTCAGCGC TTACGCCTTC
GACACCGAAC GCGAAGAGTA TTGGGCGCAC ATCACGACCG GCACCCACGT CGCGCAGATC
TGCCTGTTTT TGCTGGTGGA GGCGCGCTTC ATCCCCGGCG TGCTGCTGCA AACGGCGCCG
CCCAGGGGCC GGCAGGCCCA GGGCATCGGC AGCTATGAGC TGATTGATCT CGACCTCTCG
CGCTACGACG CGATCAACGC GCGGCTTGCG GTCGCGCAAC AGGATGCCGT CTCCTTCCTC
AAAAGCGGCA TCGCCACACG CAACCCGCGT TTCAACTCGC TGATCGAGGA AATAGAACGC
ATCGCCGTCC AGAGCAAAGC GCCCATTTTG CTGACCGGGC CCACCGGCGC AGGCAAGTCC
ATGCTGGCAC GGCGGATCTT TGAGCTCAAA AAGACGCGCC ACCAGGTCAG CGGCAGCTTT
GTCGACGTGA ACTGCGCGAC CTTACACGGC GACGGCGCGG GCTCCACGCT GTTCGGCCAC
AAAAGGGGTT CGTTCACCGG CGCGGCAAGC GACCGCCCCG GCCTGCTGCG CACCGCCGAC
AAGGGCGTGC TGTTTCTCGA CGAGATCGGC GAACTGGGCC TGGACGAACA GGCCATGCTG
CTCAAGGCCG TCGAGGAAAA ACGCTTCTTG CCCGTCGGCG CCGACCGGGA GGTCGACAGC
AGCTTCCAGT TGATCGCCGG CACCAATAAG GACTTGCGTT CGGAAGTCTC GCACGGGCGC
TTCCGCGAAG ACCTGTTCGC GCGTATCAAC CTGTGGACCT ACACCATGCC CGGCCTCGGC
CAGCGCCGGG AGGATATTGA ACCCAATATG GACCACCAGC TCATGCTGGC GTCCGAAGAC
CTTGGCCGGA AAACCCGCAT GACCACCGAG GCACGCGCAG CGTACCTGCG ATTTGCGCAG
TCAGGTGAAG CCATCTGGAC CGGCAATTTC CGGGACCTGA GCGCATCGAT CACGCGTCTT
GCCACGCTGG GTGACAACGG CCGTATCGGC GTGGGCCTGG TGGAGGCAGA GATAGCGCGG
CTACGTTGGC AGTGGCAGGC CACGGCACAG GAAACCGGCG GCATTGCCGT ATCGCTTGCT
GAATTGATGG GGAGCGCTGC GGACACGCTT GATTATTTTG AACAGCTGCA ACTTCGGGCT
GTGATTGATG TCTGCCGAAG AAGCGCTTCC CTCAGCGATG CCGGGCGAGC GCTCTTCAAT
GTATCGCGCA CCCAGCGCAG CGTGGTGAAC GACGCGGACC GGCTGCGCAA GTACTTGCTG
AAGTTTGACC TGACCTGGGA GAAGCTGTCA GCCTGA
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| Protein sequence | MKKKVVMGFL GTQLDSGLGS ARWEKWRPTV SIAQHEDLIV DRLELMHDLR NKPLAERVRD
DVVQLSPGTE VRLSEMNLAN PWDFGEVYGA LYDWVSAYAF DTEREEYWAH ITTGTHVAQI
CLFLLVEARF IPGVLLQTAP PRGRQAQGIG SYELIDLDLS RYDAINARLA VAQQDAVSFL
KSGIATRNPR FNSLIEEIER IAVQSKAPIL LTGPTGAGKS MLARRIFELK KTRHQVSGSF
VDVNCATLHG DGAGSTLFGH KRGSFTGAAS DRPGLLRTAD KGVLFLDEIG ELGLDEQAML
LKAVEEKRFL PVGADREVDS SFQLIAGTNK DLRSEVSHGR FREDLFARIN LWTYTMPGLG
QRREDIEPNM DHQLMLASED LGRKTRMTTE ARAAYLRFAQ SGEAIWTGNF RDLSASITRL
ATLGDNGRIG VGLVEAEIAR LRWQWQATAQ ETGGIAVSLA ELMGSAADTL DYFEQLQLRA
VIDVCRRSAS LSDAGRALFN VSRTQRSVVN DADRLRKYLL KFDLTWEKLS A
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