Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1405 |
Symbol | |
ID | 4011785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1442884 |
End bp | 1443495 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637941085 |
Product | TetR family transcriptional regulator |
Protein accession | YP_548252 |
Protein GI | 91787300 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.520137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC GTACGGCGGA GACCAGCAAA GTGAGTGATG AGCAGGGTGT CCTGAGCGTG CGGGAACGCC TCCTTGAGAC CGCGGCGAGG CTGTTCTACC AGGAAGGCGT CAGAGCCGTC GGCGTCGATC TTGTGGTCGA ACGATCCGGC GTCGCCAAGA CCAGCCTCTA CCGCCACTTC GCCACCAAGG ACGATCTCGT GGTTGCATTT CTCGAGCGCG AGGACGCCGA GTATTGGAGT GACTGGGAAA GTGCTGCGGC GCAAGGCAAG GATGATGCCG AAGCGGAACT TCAGGCGCTT CTGCGCTGGA TCGCCGAGCA TATCGCCGGG CCGAAGTACC GCGGCTGCCC GTTTCTCAAT GTGGCGACCG AGTTCCCGGC CCCAGCCCAT CCCGCCCGCG CAGTCGCCAG AAGGAACAAG GTGGAGCTGC ATCGCCGTCT CGGCGTGCTG GCCAGGAAAT TGGGGGCTCG CAAGCCTGAC GAGCTGGCCG ACCAGCTTGT GCTTCTCATC GATGGTGCCT ATATGAACGG TCCGCTTCTC GGCAAGAAGG GGCCGGCGCA CTCGTTCGTG GCGGCGGGAC TGGCTTTGAT CCTTGCTGCT CAACGTCGCT GA
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Protein sequence | MKKRTAETSK VSDEQGVLSV RERLLETAAR LFYQEGVRAV GVDLVVERSG VAKTSLYRHF ATKDDLVVAF LEREDAEYWS DWESAAAQGK DDAEAELQAL LRWIAEHIAG PKYRGCPFLN VATEFPAPAH PARAVARRNK VELHRRLGVL ARKLGARKPD ELADQLVLLI DGAYMNGPLL GKKGPAHSFV AAGLALILAA QRR
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