Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1298 |
Symbol | |
ID | 4012192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1340627 |
End bp | 1342606 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637940976 |
Product | hypothetical protein |
Protein accession | YP_548146 |
Protein GI | 91787194 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.594857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.225568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTA ACGAAAAATT TGACCAGCAC GGCGCATGGC GACGCGGATT TGCCCTGCGG CTGAAGTTGC TTGCCGAGTG GATGAAAGAC CACGACCTGC TCGACGCGGC AGTGGAAGAG CGGCTGCACA GGCTGGAGTC GCAGGTGCGC TCCGACAAGG TCATGGTGGC TTTTGTGGCG GAATTTTCGC GTGGCAAATC CGAGCTGATC AATGCCATCT TCTTTGCCGG CTATGGCCGC CGCATCATGC CGGCGAGCGC TGGCCGCACT ACCATGTGCC CGACCGAGCT GGGCTACGAC GCCGATGTGC CACCCTGCCT GCGCCTGTTG CCGATCGAGA CGCGCCTGAA GTCCCAGGCG CTGATGGAAT GGCGCATGGT GCCCGAAAAG TGGACGCGCG TTGACCTGGA CGTGAACGAC CCGGCCCAGC TGGCGCAGGC CCTCGAGAAG GTCGCCGAGG TTCGGCATGT CACCCAGGAA GAGGCCCGCT TGCTCGGATT CTGGAACGAC AGCACGCCGG AAGACAACCC CCTGGTGGGC GCCGATGGCT TGATCGAAGT GCCGAAGTGG CGTCATGCGC TGATCAACAT CGCGCATCCG CTGCTCAAGC AGGGTCTGGT TATCCTCGAT ACGCCGGGCC TGAATGCGAT AGGCGCCGAG CCTGAGCTGA CCGTCAGCCT GATCCCTCAG GCGCATGCGG TGGTGTTCAT CCTCGCCGCT GATACCGGTG TGACCAAATC CGACCTGTCC ATCTGGCGCG AACACCTGAT CACCGAGGGT GACGCCAGCG ACGCGCGCCT GGTGGTGCTG AACAAGATCG ACACCATGTG GGATGCCTTG AGCACACCCG AGCAGGTGCA GGCGCAAATT GACCGGCAAA GGGTGACATC GGCCGAAATC CTGGGGCTGC CCGAGTCGCA GGTCATTCCG GTTTCTGCGC AAAAAGGATT GCTTGCCAAG GTGACGGGCG ACAAGGCGCT TTTGCAGGCC AGCCGCTTGC CGGTGCTTGA GCTCGCATTG GCCCAGGGCG TGATGGGCCA GCGCCAGAAG ATCCTGCGCA CGGCAGTGGC CGGCGGTATT GGCGAGCTGA GAATCGAGGC GGGGCGCGCC ATGCACATTC GCCGGCGTGA CCTGGCCGAG CAGATGATCG AGCTGCGCGG CCTGAGAGGC AAGAACATCT CCGTGATCAA GCACATGCGC ACGCGCATCG AGCAGGAGCA GGGCGAATTT GACACCAGCG GCGCCAAAAT ACATGCCGTG CGGTCCGTGC ACCTCAAATT GCTTCGGGAA ATGTTTACCC TGCTCAGCAC GCCAACGCTG AAGGCCGAGT TGGCCGAACT GACGGCGACG CTCAAGAAGT CGGGTATCAA ACTCGGCGTG AGGAAGGCTT ACGGCCAGAC CTTTTCCCGG CTGCGCGAGG GCCTGCAGAA GTGCCAAATT CTCAGTGGCG AAATCCAGTC CATGCTGACC GCCTCTTTTC GGCAGTTGAA TGCTGAATTC AGCTTCTCGC TGCAGGCGCC CAAGGAGCCT GAGCTGGTCC GGTACGTCAA CGACCTGGAA CTGATACAGC GCAGCCACCT GCAATACCTG GGGGTGAGCA ATATCCTGAA ACTGTCGCAG GCCGAGTTTT CCGAGCGGCT GGTTCGGGCG CTGGCCACGC GCCTGCGGGT GGTGTACGAG TCCGCCTTGG GCGAAGTGGA ACTCTGGAAC AAGTCAGCAG CATCACAGCT GGACGCGCAG CTGCGCGAGC GGCGCCGCAA TTTCGGGCGC AGGCTCGAAG CGATCGAGCG TATCCAGCAG GCAGCATCCG GCCTGGACGA GCGCATTGCC GAGATTGAGG ACCAGGAGAA TGTCCTCAAT GAGCTCGACA CCAAGCTCAA AGAGCTGACC GAGCATCTGA TGGGCGGGCC TGCAACCCAT CCCAAGGCAG AAGAGCCGGC GGTCGCCATG GAACAGGCGG CGATGAGCCA GGCAGCCTGA
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Protein sequence | MSFNEKFDQH GAWRRGFALR LKLLAEWMKD HDLLDAAVEE RLHRLESQVR SDKVMVAFVA EFSRGKSELI NAIFFAGYGR RIMPASAGRT TMCPTELGYD ADVPPCLRLL PIETRLKSQA LMEWRMVPEK WTRVDLDVND PAQLAQALEK VAEVRHVTQE EARLLGFWND STPEDNPLVG ADGLIEVPKW RHALINIAHP LLKQGLVILD TPGLNAIGAE PELTVSLIPQ AHAVVFILAA DTGVTKSDLS IWREHLITEG DASDARLVVL NKIDTMWDAL STPEQVQAQI DRQRVTSAEI LGLPESQVIP VSAQKGLLAK VTGDKALLQA SRLPVLELAL AQGVMGQRQK ILRTAVAGGI GELRIEAGRA MHIRRRDLAE QMIELRGLRG KNISVIKHMR TRIEQEQGEF DTSGAKIHAV RSVHLKLLRE MFTLLSTPTL KAELAELTAT LKKSGIKLGV RKAYGQTFSR LREGLQKCQI LSGEIQSMLT ASFRQLNAEF SFSLQAPKEP ELVRYVNDLE LIQRSHLQYL GVSNILKLSQ AEFSERLVRA LATRLRVVYE SALGEVELWN KSAASQLDAQ LRERRRNFGR RLEAIERIQQ AASGLDERIA EIEDQENVLN ELDTKLKELT EHLMGGPATH PKAEEPAVAM EQAAMSQAA
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