| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1128 |
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| Symbol | |
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| ID | 4011827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 1166974 |
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| End bp | 1167720 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637940806 |
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| Product | RNA-binding S4 |
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| Protein accession | YP_547978 |
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| Protein GI | 91787026 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.44972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.373423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCTG TACGCCTCGC CAAACGTCTT GCTGAAATGC TGTCCTGTTC GCGCCGCGAG
GCAGAGCAGT ACATCGAAGG CGGCTGGGTC ACGGTCGACG GCGTGGTGGT GGAAGAACCC
CAGTTTCGCG TGCTGGACCA GACCATCGAA TTGTCAAAAG ACGCCAGTCT GCTGGCCCTC
GCGCCGGTCA CTTTGTTGCT GCACAAACCG GCGGGCCACG AGGCAGGGCT GGACGCACCG
GCAGGCCGCG GCGTTCCCTC TGCCGCCGAG CTTCTGGTTG CCGCCAACCA GTCGCCAGAC
GACCGGTCCG GCATTCGTCC GCTCAAAAAA CATTTTTCCG CCGCTGAACT GGTCACGCCT
CTGGCCACGG CGGCCAGCGG GCTGGTGGTG TTCACCCAGG ATTGGCGTGT GGCACGCAAG
CTTCGCGAAG ATGCCGGTGT GCTGGAGCAC GAGGTGATTG TGGAGGTGAC AGGAGAGATC
AAGCCCGGCG GCCTGGAGCG CCTGAATCGC ATTGATCACG GTTTCACCTT CAACGGCGTA
CTGCTGCCGC CGGCCAAGGT GAGCTGGCAA AGCGAGGCGC GCCTGCGTTT CGCGCTCAAG
GGCGAGCGGC CCGGGCAGAT TGCCTACATG TGCGAAAGCG TCGGGCTCAG GGTGGAGGCC
ATGAAGCGCC TGCGCATTGG CCGAGTTCCC ATGAGTAACC TGCAGTCCGG CCGATGGCGC
TACCTGTTGC CCCATGAGCG GTTTTGA
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| Protein sequence | MEPVRLAKRL AEMLSCSRRE AEQYIEGGWV TVDGVVVEEP QFRVLDQTIE LSKDASLLAL
APVTLLLHKP AGHEAGLDAP AGRGVPSAAE LLVAANQSPD DRSGIRPLKK HFSAAELVTP
LATAASGLVV FTQDWRVARK LREDAGVLEH EVIVEVTGEI KPGGLERLNR IDHGFTFNGV
LLPPAKVSWQ SEARLRFALK GERPGQIAYM CESVGLRVEA MKRLRIGRVP MSNLQSGRWR
YLLPHERF
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