| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0973 |
|---|
| Symbol | |
|---|
| ID | 4011729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 991461 |
|---|
| End bp | 991985 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637940653 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_547826 |
|---|
| Protein GI | 91786874 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0109985 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAC TACACGCCAC CGAGTGCCGC GAATTCATTG CGGCGGTAAC CGAGAAAGCT
GTCAATATGG GTGTGCCCAT TTCCGTCGCC ATCGTTGGGC CCGAAGGGCA CCTGATCGCG
TTGGAGCGCA TGGACGATGC AGGCTTCATC ACCCCGGATA TTGCCCGTGC CAAGGCATTC
ACCGCTGCGG CTTTCCGCTC GATGAGCCCG CGTTTTAGCG ACGGCTTGGT CATTCAACAA
TGGTTCAAGG AGCGCAATCC GCAGATGTTG GCAAACGCAT CGGCCTTCAC CAACGGTCAG
GTAGTCGCCT CGGGCGGCTG TACGCCGGTG TTCAAGGGCA ACGACATGGT TGGCGCCTAT
GGCATCAGCG GTGCGACTAG CGCCCAGGAC GAGGAGATCG GCCAGTACGC CCGCGAGAAG
TTGGGCTGGG CGCACATGCC AGTCGACGAC ACGACGCCGG AAAGCGTCAA AAAACACGTG
AACGAGCTTT ACGCCAAGGC CGGCATTAAG GATCGATCCC TCTGA
|
|---|
| Protein sequence | MSKLHATECR EFIAAVTEKA VNMGVPISVA IVGPEGHLIA LERMDDAGFI TPDIARAKAF
TAAAFRSMSP RFSDGLVIQQ WFKERNPQML ANASAFTNGQ VVASGGCTPV FKGNDMVGAY
GISGATSAQD EEIGQYAREK LGWAHMPVDD TTPESVKKHV NELYAKAGIK DRSL
|
|---|
| |