Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0969 |
Symbol | |
ID | 4011725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 988621 |
End bp | 989463 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637940650 |
Product | prephenate dehydratase |
Protein accession | YP_547823 |
Protein GI | 91786871 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.507901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0127974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATTG CTGCAGCAAA TTTGATCGCT TGCCTGGGAC CTGTAGGCAC CTATAGTGAA GATGCTGCGA TCCTGTATTT CGGATCGAGT AGCAAACGCC TGTTGTTACC TTCGCTGGAT GCCATATTCG AAGCGTGCGA ATCGGGATTG GCTAGCCACA GTGTCGTAGC TGTTGAGAAC AGCACGGAGG GAGCCGTTCC AAGGACCCTT GATCTTTTAT ATAAAACAGA GCTTCAAATA TGCGGTGAAT TGTCGCTGTT ACTGCGACAT GATCTTTTAA CGCAATCTGG ACAGCTCCAT GGTGTTACTC GTGTTCGCGC ACACGCACAG GCGCTTGCGC AGTGTCATGG ATGGTTGTCC ACGAATGCGC CACACTTGAT ACGAGAAGCG GTGTCAAGTA ATGCGGAAGG CGCAAGGCTT GCAGCCCAGG ACCCAACCTC TGCTGCGATT GGCGGTCTGA GATCGGCTGA GGAATACGGA CTATTGGCTG CCTTTCATGC CGTTCAGGAC GATCCGAATA ATCGCACCCG ATTTTTTGTT TTAAGTCGCA AAGACAACGC ATCAGAAGCT CTCGGGGTCG GGTGTAAGAC ATCAATCATT GTGTCGGTGC CGAATGAGGT GGGCGCTCTT TTCCGTGTGG TTGAGCCTTT CGCTCGACAT GGTGTCTCGA TGTCCAGGTT TGAGTCGCGG CCTGTCAAGT CGGGGGCTTG GGACTACAAC TTCTATATAG ATATCGTTGG TAGTCGTTTG GAGGAGAAAG TGGCGAATGC GCTCGCTGAA CTTCAGCAAC AGGGAGCAAA AGTGAAGTTA CTAGGCTCTT ACTTCGACAC GGATCAACAT TGA
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Protein sequence | MRIAAANLIA CLGPVGTYSE DAAILYFGSS SKRLLLPSLD AIFEACESGL ASHSVVAVEN STEGAVPRTL DLLYKTELQI CGELSLLLRH DLLTQSGQLH GVTRVRAHAQ ALAQCHGWLS TNAPHLIREA VSSNAEGARL AAQDPTSAAI GGLRSAEEYG LLAAFHAVQD DPNNRTRFFV LSRKDNASEA LGVGCKTSII VSVPNEVGAL FRVVEPFARH GVSMSRFESR PVKSGAWDYN FYIDIVGSRL EEKVANALAE LQQQGAKVKL LGSYFDTDQH
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