| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0946 |
|---|
| Symbol | |
|---|
| ID | 4011080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 967901 |
|---|
| End bp | 968995 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940626 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_547800 |
|---|
| Protein GI | 91786848 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.239636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.546641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCC TCTACCTTGC CCTTTCGGGC GGAGGAATGC GCGCCATGGT CTTTCACTGC
GGCGTGCTGA AATCCCTGGC GGAGCATGGG GCGCTGGAAC ACGTGAGCAA GGTCTCCACC
GTGTCCGGCG GAAGCCTGCT GGTGGGCCTG CTCCTGCAGC TCAATGGCAT GCGCTGGCCC
ACCAGCGATG AGTACCTCGA GGCGCTGTTG CCGAAGCTGA AGGACGTGCT GACACAGACA
GACCTGCAAA AGGCCGCGAT GCTGGCCATG CTGCGCCCGG CCAACTGGCG CTTTGCCCTG
TCCCGCGCCA ACGTGCTGGC TTCGGCCATT GGCAGCACCT GGGGTGTCGA TGCCCTGCTC
GATGAACTTC CCGCATCGCC GGTCTGGTCG ATCAATGCCA CCACCGCTAA AACCGGCAAG
CGCGCCTGCA TTGAAGGCGG CCAGTTGCGC GACTGGACAC TGGGGTCCAC CCCAATGAAG
CGATTTCCGC TGCGCGACGC CATGGCCGTG TCAGCGGCCT TCCCCGGGCT GATAGGCCCT
TACGTCCTGC AAGCCGACAG CTTCGACTGG GACCTGCCGA TGTATGCATC GGGCGATGAG
GCCCGGCCGG CGGAAGACCG CTTCGCCAGA ATTCATCTTT ACGACGGCGG TGTATACGAC
AACCTCGGGC TTGAGCCATT CTTTGATGCG GGTTTCGGCC CGAAGCCGAA AGTTGACGGC
GTGATCATTT CGTCCGACGC AGGCGCGCCT CTGCCCAAAG GCTTCGATAT GGGGCGGCTG
AACCTGTTCC GGCTCAAGCG CGTGGCCGAC ATCATGTCTG ACCAGACCCG GGCATTGCGC
GCGAGAGGGC TGATGGCCTA TGCGTCGAAA GCAAGCGGGC GCGCCGCTTA TTTGCGGCTT
GGCGCCACCG CCCAGGACAT CGCCAGGCGC TCGGGCGCCG CATGCCCCGC CGGCCACTGG
CTCGACAAGG AGCGCGTGAA GGCTGCAGCC GCGTACCCGA CCTCGCTGAA AAAGGTGCCA
CTGCAGGCCT ACGAGCTCCT TTTCAGGCAC GGCTACGAAT CCGCCGCCAT CGGGCGTGCC
GTGTTCGGGT TATGA
|
|---|
| Protein sequence | MKPLYLALSG GGMRAMVFHC GVLKSLAEHG ALEHVSKVST VSGGSLLVGL LLQLNGMRWP
TSDEYLEALL PKLKDVLTQT DLQKAAMLAM LRPANWRFAL SRANVLASAI GSTWGVDALL
DELPASPVWS INATTAKTGK RACIEGGQLR DWTLGSTPMK RFPLRDAMAV SAAFPGLIGP
YVLQADSFDW DLPMYASGDE ARPAEDRFAR IHLYDGGVYD NLGLEPFFDA GFGPKPKVDG
VIISSDAGAP LPKGFDMGRL NLFRLKRVAD IMSDQTRALR ARGLMAYASK ASGRAAYLRL
GATAQDIARR SGAACPAGHW LDKERVKAAA AYPTSLKKVP LQAYELLFRH GYESAAIGRA
VFGL
|
|---|
| |