| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0832 |
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| Symbol | |
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| ID | 4010947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 855021 |
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| End bp | 855677 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637940511 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_547686 |
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| Protein GI | 91786734 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.942177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCGC CCGGCATCGC GTCTGCAACG GCCCTCAGGC AATTTTCAAG AAGAAGGTGC
CTGCAGTCCC TGTCTGCCGC GTGCATTCCG TTCTTATTTT CAGAGCAGGC GAGCGCCGGC
GCCCAGATTG AAGAGCCATT GATGGACTCG GTCCGATCGG CACTGAGCTC GGCCGTCGCC
AACCAGGCCC CCCCGGTGCC GGAGTTCAAG GACACCGAAA GCCGGCTGGC GTATCTGCGC
TGGCTGGGCG CCATGAGCGA TCGCCTGAGA AAGAAAAACC CCGAGTGGCA AATCCGCAAG
GAGTTCCTGC AAACCGCCTG GTATGAGAGC AAACGCGCCG GGCTGGACGT CACGCTGGTC
CTCGGCCTGA TCCAGGTCGA AAGCAATTTC CGCAAGTTCG CCGTGAGTAA CGTGGGCGCG
CGCGGTTACA TGCAGGTCAT GCCCTTCTGG ACACGCGTGA TTGGAGACGG CGATCCGTCC
AAGCTCTTTC ACATGCAGAC CAATTTGCGC TTCGGCTGCG TCATCCTTCG CCATTACCTG
GACCGGGAAC GCGGCGATCT GTTCTTGGGC CTGGGCCGCT ACAACGGCTC GCGCGGCAAG
GCGCCCTACC CGAACGCGGT GATGGGTGCG AGCAAACAGT GGGAATTCAG CGGCTGA
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| Protein sequence | MTAPGIASAT ALRQFSRRRC LQSLSAACIP FLFSEQASAG AQIEEPLMDS VRSALSSAVA
NQAPPVPEFK DTESRLAYLR WLGAMSDRLR KKNPEWQIRK EFLQTAWYES KRAGLDVTLV
LGLIQVESNF RKFAVSNVGA RGYMQVMPFW TRVIGDGDPS KLFHMQTNLR FGCVILRHYL
DRERGDLFLG LGRYNGSRGK APYPNAVMGA SKQWEFSG
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