| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0662 |
|---|
| Symbol | |
|---|
| ID | 4011122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 673873 |
|---|
| End bp | 674784 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637940343 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_547519 |
|---|
| Protein GI | 91786567 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCA AAGTGCTTGC CAAAATTGCC GAGGTCATCG CAATCGCGCC CACCTCCCGG
CGCAAGGTGC TGGCGCTGAT CCTGCAAGAC CCGCAACGGG TGCTCGATGA AAGTTTTGAG
CAGCTGGCGC AGCGCGCCGG CAGCTCGGTG CCCACGGTGA TGCGCACCTG CCGCGATCTG
GGCTACCCGG GCCTGCGCGA GTTCAAGCTC GCGCTGGCGC AGGAAATGGC CGTCAGCGGC
TCGCCCCTGC ACCGCCGGGT GCAGCTGCAT GACGACGCAG AGGAGGTCAT CTCCAAGGTC
ATCAAGGGTG CGGCCACGGC CGTCAGCGGC GTGCAGGCCC AGCTCAGCGT GGCTGCGGTG
GAGGCGGCGG CCGACGCCAT CGTGCGTGCC AGCCGGGTCG ATTGCTACAG CGTCGGCGTG
ACCTCCAGCT TCATGGCCTC CGACATGCAG GCCCGGCTGT TCCGGCTGGG GCTGGTGTCC
AACGCCTACC TCGACATTCA TTTGCAGCTG GTGTCCGCGG CCACCATCGG CAAGCAGGGC
GTGGTGTTTG CCATCTCGCA CGTGGGCGGC ATGCCGTCGT TGCTCGAAGC GGTAGACGTG
GCCCGCTCGC AAGGCGCCAC GGTGATCGCC CTGACCCAGC AGGGGACCGC GCTGGCCGAG
CGGGCCGACA TTGTGCTCGG CATCCATGTG CCGGAAGACC CGGTCATGCA TGTGGGCACC
GAGGCCTACC TGGTCCACCT CACCGTGATT GAAATCGTCA CCGTGCTGGT GGCGCAGCGC
CTGGGTGACC TGGCCGTCAA ACGCCTGGGC GGCGTGCGCG ACGTGCTCAG CACGCGCGGC
GTGGACATGC GGCACTATCC CAGGCTCGAT TGGGACACGG TCACCGCCGT CAAGGAAAGC
AAACTCAAAT GA
|
|---|
| Protein sequence | MTSKVLAKIA EVIAIAPTSR RKVLALILQD PQRVLDESFE QLAQRAGSSV PTVMRTCRDL
GYPGLREFKL ALAQEMAVSG SPLHRRVQLH DDAEEVISKV IKGAATAVSG VQAQLSVAAV
EAAADAIVRA SRVDCYSVGV TSSFMASDMQ ARLFRLGLVS NAYLDIHLQL VSAATIGKQG
VVFAISHVGG MPSLLEAVDV ARSQGATVIA LTQQGTALAE RADIVLGIHV PEDPVMHVGT
EAYLVHLTVI EIVTVLVAQR LGDLAVKRLG GVRDVLSTRG VDMRHYPRLD WDTVTAVKES
KLK
|
|---|
| |