| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0606 |
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| Symbol | |
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| ID | 4011241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 613910 |
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| End bp | 614710 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637940288 |
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| Product | ribosomal large subunit pseudouridine synthase F |
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| Protein accession | YP_547464 |
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| Protein GI | 91786512 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000119564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTATCC CGAAGGCCGC CGCCCCGGCC GCCACCGCTT CCGCATCGTC CACCGTGCGG
CTGAACAAAC GCATGGCCGA GTTGGGCCTG TGCTCACGCC GCGAAGCCGA CGACTGGATT
GCCCGTGGCT GGGTGCTGGT CAATGGCGCG CCCGCCGTGA TGGGCCAGCC GGTCGCCCCT
GACGCGCGCA TCGAAGTGGA TCGCCAGGCC GAGCAGCAGC AGCGCCAGCA GGTCACCATC
CTGATCAACA AGCCCGTTGG CTATGTCAGC GGCCAGGCTG AAGACGGCCA TGAGCCTGCG
GTGGTGCTGG TACAGCCGCA AAACCGCTGG CGCGAGTGCA ACAGCCGCAT GCGCTGGGGT
CCCGAGCAGT TGCGCGGCCT GGCGCCGGCC GGTCGCCTGG ACATTGACTC CATCGGCTTG
CTGGTGCTGA CACAGGACGG GCGCGTGGCG CGCCAGCTCA TCGGTGAAAA CTCGGAGATA
GAAAAAGAGT ACCTGGTGCG GGTCAGCTAT GGCGCCGAAA CGAGCAACGT GCAGGCGGTG
TTCCCGCGTG AAAAGCTGGC CTTGCTGCGC CATGGCCTGA GCCTCGACGG GCAGGCCTTG
CGGCCGGCGC AGGTGGACTG GCAAAACCCC GAGCAACTGC GGTTTGTGCT CAAGGAAGGC
AAGAAGCGCC AGATTCGCCG CATGTGCGAG CAGGTGGGGC TGTTTGTGAC CGGACTCAAG
CGCGTGCGAA TCGGTCGGGT CAACCTCGGC CATTTGCCGG TAGGCCAGTG GCGCTACCTG
GCTGCGCACG AATCTTTTTA G
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| Protein sequence | MRIPKAAAPA ATASASSTVR LNKRMAELGL CSRREADDWI ARGWVLVNGA PAVMGQPVAP
DARIEVDRQA EQQQRQQVTI LINKPVGYVS GQAEDGHEPA VVLVQPQNRW RECNSRMRWG
PEQLRGLAPA GRLDIDSIGL LVLTQDGRVA RQLIGENSEI EKEYLVRVSY GAETSNVQAV
FPREKLALLR HGLSLDGQAL RPAQVDWQNP EQLRFVLKEG KKRQIRRMCE QVGLFVTGLK
RVRIGRVNLG HLPVGQWRYL AAHESF
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