| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0579 |
|---|
| Symbol | |
|---|
| ID | 4011331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 582701 |
|---|
| End bp | 583693 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637940261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_547437 |
|---|
| Protein GI | 91786485 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC TCAACACCGT CAAAACCGCG CTGGCGGCTT GTACGGCAGC GCTCGCGCTG
TCGGCCAGCC TGCCGGCTTT CAGCCAGGCC TTCCCCGACA AACCCGTCAC CCTGGTGGTG
CCGTTCGCTG CCGGCGGCCC CACCGACGTG CTGGCCCGCA TGATCGCCAT TCCCATGGGC
AAGTCCCTGG GCCAGACGGT GATCGTTGAA AACACCGTCG GCGCCGGCGG CACGATTGCG
GCCACCCGGG TGGCGCGATC CACCCCCAAT GGCTACACCC TCTTTATTCA CCACATGGGC
ATGGCCACCG CGCCGGCGCT GTACAAAAAG CTCAGCTTCG ATCCGCTGAA AGACTTCGAG
TACATCGGCC AGGTGGTGGA TGTGCCGATG ACGCTGCTGG CGCGCAAGGA CTTTCCCGCC
AACAACTTCA ATGAGCTGCT GGCCTACGTC AAGACCAACA AGGAAAAGGT GTCGCTGGCC
AATGCCGGGC TGGGCGCCGT GTCGCACCTG TGCGGCCTGC TGTTCATGAG CCAGATCGGC
GTGGAGCTCA ACACCATTCC CTACAAGGGT ACCGGCCCCG CCATCAATGA CCTGCTGGGC
GGCCAGGTGG ACCTGCTGTG CGACCAGACC ACGCAAACCG TGCCGATGAT CAAGGATGGC
CGCGTCAAGG TGTTCGGCGT GACCTCGCTC AAGCGCCTGT CGGCTTTGCC CAATGTGCCC
ACGCTGGACG AGCAGGGTCT CAAGGGCTTT GAGGTCAAGG TGTGGCACGG CATCTACGCA
CCCAAGGGCA CGCCGGCACC GGTGCTCGAC AAGATCAACG CCTCTCTGCG CGCGGCCATG
CAGGATCCGA CGGTCAAGCA GCGCCTGGCC GAACTGAGCT CGGACATCGT GCCGCTGGAC
AAGATGACCC CGGCCGCCCT GAAGAGCCAC CTGGAGGCCG AGATCAACAA ATGGAGCCCG
GTGATCAAGA AGGCTGGCGT GTACGCCGAT TGA
|
|---|
| Protein sequence | MIKLNTVKTA LAACTAALAL SASLPAFSQA FPDKPVTLVV PFAAGGPTDV LARMIAIPMG
KSLGQTVIVE NTVGAGGTIA ATRVARSTPN GYTLFIHHMG MATAPALYKK LSFDPLKDFE
YIGQVVDVPM TLLARKDFPA NNFNELLAYV KTNKEKVSLA NAGLGAVSHL CGLLFMSQIG
VELNTIPYKG TGPAINDLLG GQVDLLCDQT TQTVPMIKDG RVKVFGVTSL KRLSALPNVP
TLDEQGLKGF EVKVWHGIYA PKGTPAPVLD KINASLRAAM QDPTVKQRLA ELSSDIVPLD
KMTPAALKSH LEAEINKWSP VIKKAGVYAD
|
|---|
| |