Gene Bpro_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0175 
Symbol 
ID4012219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp191691 
End bp192515 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content72% 
IMG OID637939859 
Product17 kDa surface antigen 
Protein accessionYP_547038 
Protein GI91786086 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT CCGTCGACAA CCTCCAGCCG GGCCAGCAAG CTGCCTCGTC TGGCAGCAAG 
CCCCTGTGGG CGGCGATCGG CATACTCGGT GTGGCGGTGC TGGCCATGGG CGCCACCATG
CTGTACAACC AGCGTGCCCA GCCCCCGGCT GCCAGCGTGG CGGCTGTAAC GATGCCCCAG
GCCCCGGCGG CACCGCAGCT GGCCGGGCCG GCGCCTTCTG CCAACGCAGT CGACGACCTG
ATTGAAAAGC CGGTGGCCAC CCCGGCCAAG CCCGCCGCCG CGCCCGCGCC GGCCAAAAAA
GTGGTCAAAC CCCAACCCAG GCCTGTGCCG ACACAGGCGC CGAGCTACTC GGGCGTTTCA
CCCGCGCCCT CTGCCGTACC GGCCCCGGCC ATGGCGGCGG CACCGACGGT GTGCGCCGTG
TGTGGTTCCG TTGAATCGGT CACGCCGGTG GAGCGTTCCG CCAAACCAGC CGGCCCCGGC
GTGGGCGCTG TGGCTGGCGG GGTGCTGGGT GCGGTGCTGG GCAACCAGGT GGGCCATGGC
GGCGGCCGCA CCGCCGCCAC CATCCTGGGC GCGGTCGGCG GCGGTTTTGC CGGCAACGCG
ATCGAAGGGC AGATTCGCAA GGAAACGGTT TACCAGGTGG GTGTGCGCAT GGAAGACGGT
TCGCGCCGCA CCGTGGAAGT GGCGCGCGCG CCCGCAGTGG GCAGCCGCGT GACCGTGGAC
GGCGCCGTCC TGCGCACCAG CGATGGTGCA ACCTACGGCC CCAAGCCGCC ACCGGCGCCT
GTGGCCGCAC AGCCTGCACC TGCACCGGAA TACCAGGGGC GTTGA
 
Protein sequence
MNTSVDNLQP GQQAASSGSK PLWAAIGILG VAVLAMGATM LYNQRAQPPA ASVAAVTMPQ 
APAAPQLAGP APSANAVDDL IEKPVATPAK PAAAPAPAKK VVKPQPRPVP TQAPSYSGVS
PAPSAVPAPA MAAAPTVCAV CGSVESVTPV ERSAKPAGPG VGAVAGGVLG AVLGNQVGHG
GGRTAATILG AVGGGFAGNA IEGQIRKETV YQVGVRMEDG SRRTVEVARA PAVGSRVTVD
GAVLRTSDGA TYGPKPPPAP VAAQPAPAPE YQGR