Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0056 |
Symbol | |
ID | 4011775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 57853 |
End bp | 58518 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637939742 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_546921 |
Protein GI | 91785969 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.423045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCC GCCCGAAATT CATTACCTTT GACTGCTACG GCACCCTGAC ACGTTTTCGC ATGGGCGATA TGGCGCGCGA GATGTTTGCC GACCGCATCC CGGCCGCGCA GATGGAGCTG TTTGTCGCCG ACTTCAGCGC CTACCGTTTT GACGAAGTGC TGGGCGCCTG GAAGCCTTAT GCCGATGTGC TCAGGAACGC CTTGAACCGC ACCTGCAAAA AATGGAACAT CAAGTGCACC GACGCCGAAG GCCGGGCTTA CTACGACGCC GTGCCGACCT GGGGCCCGCA TGCCGATGTG CCGGCCGGCC TGTCGCGCAT CGCCGACAAG ATTCCGCTGG TCATTCTTTC CAACGCGTCC AACGACCAGA TACACAAGAA CGTAGACAAG CTCGGTGCGC CATTTCATCG TGTTTTCACC GCTCAGCAGG CCCAGGCTTA CAAGCCGCGT CTGCAGGCCT TTGAGTACAT GCTGGACCAG CTCGGTTGCG GTCCTGAAGA CATCCTGCAC GTGTCGTCCA GCCTGCGTTA CGACCTGATG TCGGCTGATG ACCTGGGCAT CAAGAACAAG GTGTTCGTCA ATCGCGGTCA TGGTCCTGGC AACCCGGCGT ACAACTACGT CGAGATCCAG GACATCGGCG GCTTGCCCGG TGTGGTCGGC CTTTAA
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Protein sequence | MTFRPKFITF DCYGTLTRFR MGDMAREMFA DRIPAAQMEL FVADFSAYRF DEVLGAWKPY ADVLRNALNR TCKKWNIKCT DAEGRAYYDA VPTWGPHADV PAGLSRIADK IPLVILSNAS NDQIHKNVDK LGAPFHRVFT AQQAQAYKPR LQAFEYMLDQ LGCGPEDILH VSSSLRYDLM SADDLGIKNK VFVNRGHGPG NPAYNYVEIQ DIGGLPGVVG L
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