Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0048 |
Symbol | |
ID | 4011767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 49129 |
End bp | 50259 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637939734 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_546913 |
Protein GI | 91785961 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG ACAAACGCAG CGATGTATTG ATTATTGGTG GCGGCCTGAT GGGCGTGACC ACGGCTTTCT TTTTGCGCCA TCACCACGGC CTTGGCGTGA CCTTGCTCGA ACGCGAGCTC ATAGGCCGGC AAGCCAGCGG CACCAACTTC GGCAATGTGC GGCGCCAGGG CCGCGCGCTG GAACAAATGC CGCTGGCCAA CCGCGCGCAT GCGGTCTGGG GTCGCGTCAA AAGCCTGCTG GGCGAAGACA TAGAGTTTTT GCCGCTGGGC CACCTGCGTG TCTGCTACAC CCACGAACAA GCCGCCAAAC TTGAAGAGCA TGCCAGGCTG GCGCGCCCCA TGGGCCTGGA CCTGGAGCTG CTCAGCGCCG ACATGCTGCG CCAGCGTTAT GGTTTTTTCA GCCAGGAAGT GGTGGCGGGC TCCCTCTCGC CGCTGGACGG CCATGCCAAT CCGCGACTGG CCGGCCCGGC CTTTGGCCGC GCGGCGCGGC GCGCCGGCGC CGACATCCTG GAGCACCAGG AGGTCGTGCA TATTGAAAAG GACGGCGATG ATTTTGTCGC CCACACCGCA GCCGGCAAAA CCTTTAGGGC GGCGCAACTG CTGGTCGCCA GCGGCGCCTG GTCGGACAAA CTGGCAGCGG CCTTTGATGA GCCCGTGCCC ATGGAGGCAC GCGGCCCGCA GATGGGCGTG ACCGAGCCGG TGCCGTATGC GATTGGCCCG TCGATAGGCG TGTCATCGCC TGTCGAAGAA GAGGGTTTGT ACTTCCGTCA AATCACACGC GGCAACATCG TGTTTGGCGG CGGGCTGAAA GGCCCGGCAT CAACCGAAAC GATCCGCGCC GGCGTCAGGC CCGACAACAC CTTGCGCCAG TTCCGCGAGC TGCGGCGTTT TGTGCCGGCC ATGGCCAGGC TGCAATTGCT GCGCGTCTGG AGCGGCATAG AGGGTTATGT CGCCGACTCG CGTCCGGTAA TGGGCCCGAG CGCGCGCATG CCCGGCCTGC ACTATGCGTT TGGTTTTAAC GGCGAAGGTT TTGCGATCAG CCTGGGCGTC GGCGAGACCA TGGCAGAACT ACTGGCCACC GGCAAGACGG TGACGCCGAT CGAGGCGTTT TCCATCGGGC GGTTTGCCTG A
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Protein sequence | MSQDKRSDVL IIGGGLMGVT TAFFLRHHHG LGVTLLEREL IGRQASGTNF GNVRRQGRAL EQMPLANRAH AVWGRVKSLL GEDIEFLPLG HLRVCYTHEQ AAKLEEHARL ARPMGLDLEL LSADMLRQRY GFFSQEVVAG SLSPLDGHAN PRLAGPAFGR AARRAGADIL EHQEVVHIEK DGDDFVAHTA AGKTFRAAQL LVASGAWSDK LAAAFDEPVP MEARGPQMGV TEPVPYAIGP SIGVSSPVEE EGLYFRQITR GNIVFGGGLK GPASTETIRA GVRPDNTLRQ FRELRRFVPA MARLQLLRVW SGIEGYVADS RPVMGPSARM PGLHYAFGFN GEGFAISLGV GETMAELLAT GKTVTPIEAF SIGRFA
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