Gene Bpro_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0048 
Symbol 
ID4011767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp49129 
End bp50259 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID637939734 
ProductFAD dependent oxidoreductase 
Protein accessionYP_546913 
Protein GI91785961 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG ACAAACGCAG CGATGTATTG ATTATTGGTG GCGGCCTGAT GGGCGTGACC 
ACGGCTTTCT TTTTGCGCCA TCACCACGGC CTTGGCGTGA CCTTGCTCGA ACGCGAGCTC
ATAGGCCGGC AAGCCAGCGG CACCAACTTC GGCAATGTGC GGCGCCAGGG CCGCGCGCTG
GAACAAATGC CGCTGGCCAA CCGCGCGCAT GCGGTCTGGG GTCGCGTCAA AAGCCTGCTG
GGCGAAGACA TAGAGTTTTT GCCGCTGGGC CACCTGCGTG TCTGCTACAC CCACGAACAA
GCCGCCAAAC TTGAAGAGCA TGCCAGGCTG GCGCGCCCCA TGGGCCTGGA CCTGGAGCTG
CTCAGCGCCG ACATGCTGCG CCAGCGTTAT GGTTTTTTCA GCCAGGAAGT GGTGGCGGGC
TCCCTCTCGC CGCTGGACGG CCATGCCAAT CCGCGACTGG CCGGCCCGGC CTTTGGCCGC
GCGGCGCGGC GCGCCGGCGC CGACATCCTG GAGCACCAGG AGGTCGTGCA TATTGAAAAG
GACGGCGATG ATTTTGTCGC CCACACCGCA GCCGGCAAAA CCTTTAGGGC GGCGCAACTG
CTGGTCGCCA GCGGCGCCTG GTCGGACAAA CTGGCAGCGG CCTTTGATGA GCCCGTGCCC
ATGGAGGCAC GCGGCCCGCA GATGGGCGTG ACCGAGCCGG TGCCGTATGC GATTGGCCCG
TCGATAGGCG TGTCATCGCC TGTCGAAGAA GAGGGTTTGT ACTTCCGTCA AATCACACGC
GGCAACATCG TGTTTGGCGG CGGGCTGAAA GGCCCGGCAT CAACCGAAAC GATCCGCGCC
GGCGTCAGGC CCGACAACAC CTTGCGCCAG TTCCGCGAGC TGCGGCGTTT TGTGCCGGCC
ATGGCCAGGC TGCAATTGCT GCGCGTCTGG AGCGGCATAG AGGGTTATGT CGCCGACTCG
CGTCCGGTAA TGGGCCCGAG CGCGCGCATG CCCGGCCTGC ACTATGCGTT TGGTTTTAAC
GGCGAAGGTT TTGCGATCAG CCTGGGCGTC GGCGAGACCA TGGCAGAACT ACTGGCCACC
GGCAAGACGG TGACGCCGAT CGAGGCGTTT TCCATCGGGC GGTTTGCCTG A
 
Protein sequence
MSQDKRSDVL IIGGGLMGVT TAFFLRHHHG LGVTLLEREL IGRQASGTNF GNVRRQGRAL 
EQMPLANRAH AVWGRVKSLL GEDIEFLPLG HLRVCYTHEQ AAKLEEHARL ARPMGLDLEL
LSADMLRQRY GFFSQEVVAG SLSPLDGHAN PRLAGPAFGR AARRAGADIL EHQEVVHIEK
DGDDFVAHTA AGKTFRAAQL LVASGAWSDK LAAAFDEPVP MEARGPQMGV TEPVPYAIGP
SIGVSSPVEE EGLYFRQITR GNIVFGGGLK GPASTETIRA GVRPDNTLRQ FRELRRFVPA
MARLQLLRVW SGIEGYVADS RPVMGPSARM PGLHYAFGFN GEGFAISLGV GETMAELLAT
GKTVTPIEAF SIGRFA