Gene Bpro_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0036 
Symbol 
ID4012409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp38331 
End bp39395 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID637939722 
ProductLacI family transcription regulator 
Protein accessionYP_546901 
Protein GI91785949 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTTA TCCCTGACGA AACGAAAGAC CAGCCACAAC GGGCGCGTGT GGCCGATATT 
GCGCGGGCCG CCAAGGTCTC CACCGCGACG GTGGACCGCG TGCTGAACCG GCGGCCTGGC
GTGCGTGATG CTACTGCGCA GAAGGTGCTG AAGGTGGCCG CGGAACTGGA TTACCTGCCG
GAAACAGGCC TTTACGCGGC ACTCGCGGCA GCGCCGATGC GGTTGACGTT TTTGCTGCCC
GATGGCAGCA ACCGCTTTAT CCGCATGCTG GGAGACACCG TGGGCTATTC GCAGGAGCAC
CTGACGCCCT TCAACGTCAA GTGCCGCACC GAACTGTTTG AGAGCTTCAA CCCGCAGCAG
CTGGCCGCCA GCCTGCTCAA GCACGGGCAG CGCAGCGACG GCATCGCCTT CATGGCGCTG
GAGCACCCGG CGGTGCGCGA GGCCGTGAGT GTGCTGGCCG ACAGGGGCGT GCCCACCATC
ACACTGATCT CGGACCTGTC GGGCTCGCGG CGTGCCGGTT ACGTCGGGCT GGACAACCGT
GCGGCCGGCC GCACGGCGGG CTACCTGGTC GGGCGCTTCA TAGCCCCCGG CGCGCGCGGC
GGCAAGGTGG CGCTGATCGC CGGCTCGCTG AGCTACCGCG CGCATGAGGA ACGCGAAGCC
GGTTTCCTGC ACGTGATCGA AGAGATGTTT CCTACGCTGC AGGTGGTGGG CCTGCGCGAA
GGGCAGGACG ACGCGCAGAA GAACTATGAG CAAACCCGCA CCCTGCTGGA ACAGTACCCC
GACCTGGCGG GCATTTACAA CATAGGCGGT GCGTCGGATG GCGTGGCACG CGCGCTGAAA
GAGATGGGGC GCGAGCACAA GGTGGTGTTC ATCGGCCATG GCCTGACGCC GGACACGCGC
GCCATGCTGA TCGACGGCAG CATGGACGCG GTGATCACGC AAAGCCCGCA GTCCGCCATG
ATGAGCTGTG TGCGCATGTT CACCAATCTG CGCGACAAGC GCGACGTGAT GAGTGGCGTG
GATGCCGTGC GCAGCCAGGT GATATTCAGG GAAAACCTGC CTTAG
 
Protein sequence
MRVIPDETKD QPQRARVADI ARAAKVSTAT VDRVLNRRPG VRDATAQKVL KVAAELDYLP 
ETGLYAALAA APMRLTFLLP DGSNRFIRML GDTVGYSQEH LTPFNVKCRT ELFESFNPQQ
LAASLLKHGQ RSDGIAFMAL EHPAVREAVS VLADRGVPTI TLISDLSGSR RAGYVGLDNR
AAGRTAGYLV GRFIAPGARG GKVALIAGSL SYRAHEEREA GFLHVIEEMF PTLQVVGLRE
GQDDAQKNYE QTRTLLEQYP DLAGIYNIGG ASDGVARALK EMGREHKVVF IGHGLTPDTR
AMLIDGSMDA VITQSPQSAM MSCVRMFTNL RDKRDVMSGV DAVRSQVIFR ENLP