Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0002 |
Symbol | |
ID | 4011738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1723 |
End bp | 2829 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637939688 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_546867 |
Protein GI | 91785915 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0963742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.484906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGTTC TGAAAGCCAC CCAGGATAAA GTTTTGTCGG TACTGCAATC GGTCGCGGGC ATCGTGGAGC GCAGGCACAC CTTGCCGATC CTGGCCAACG TGCTGATCCG CAAAACCGGG GCGCAGCTGC AGCTCACCAC GAGCGATCTT GAAATCCAGA TCCGCACCAG CGCCGACCTT GATGGCGATG CCGGCAACTT CACCACCACG GTGGGTGCGC GCAAGCTCAT CGACATCCTG CGGTCCATGC CCAGCGACCA GACCGTGTCG CTCGAGTCGG CGCAAAGCAA GCTGATCCTC AAAGGCGGCA AGAGCCGCTT CACGCTGCAA ACCCTGCCCG CCGAAGACTT CCCGCTGGTG CAGGAAGCCG CCAACTTCGG TCCCAGCTTC TCGGTACCGC AAAAGGTGCT CAAGGAGCTG CTCAACCAGG TGTCGTTTGC GATGGCGGTG CACGACATCC GCTACTACCT CAACGGCATT TTGTTTGTGG CTGAAGGCAA GCAGCTGAGC CTGGTGGCCA CCGACGGCCA CCGCCTGGCG TTCTCGTCGG CCACGCTCGA TGTGGAAGTG CCCAAGCAGG AAGTCATCCT GCCGCGCAAG ACGGTGCTGG AAATGCAGCG CCTGCTCAGC GACAAGGAAG GCGCCATCGA GATGCAGTTT GCCGGTAACC AGGCCAAGTT CAGTTTTGAG GGCATGGAGT TTGTCACCAA GCTGGTCGAA GGCAAATTTC CCGACTACAA CCGCGTGATT CCGAAGAACC ACAAAAACAT CATCACGCTG GGCCGCGTGC CGCTGCTGGC CAGCCTGCAG CGCACCGCCA TTCTCACCAG CGAGAAGTTC AAGGGCGTGC GCCTGAACAT CGAACCCGGT ACGCTGCGGG TGGCGTCCAA CAACGCCGAG CAGGAAGAGG CCGTTGACGA GCTCGACATC GACTACGGCG GCGATGCCAT CGAAATCGGC TTCAACGTGA CCTACCTGAT CGACGCGCTG GCCAACATGG AGCAGGACAT GGTGAAGATC GAGCTGGCCG ACTCCAACAG CTCGGCGCTG CTCACCATTC CCGACGATGC GGCCTTTAAA TACGTGGTGA TGCCCATGCG CATTTGA
|
Protein sequence | MIVLKATQDK VLSVLQSVAG IVERRHTLPI LANVLIRKTG AQLQLTTSDL EIQIRTSADL DGDAGNFTTT VGARKLIDIL RSMPSDQTVS LESAQSKLIL KGGKSRFTLQ TLPAEDFPLV QEAANFGPSF SVPQKVLKEL LNQVSFAMAV HDIRYYLNGI LFVAEGKQLS LVATDGHRLA FSSATLDVEV PKQEVILPRK TVLEMQRLLS DKEGAIEMQF AGNQAKFSFE GMEFVTKLVE GKFPDYNRVI PKNHKNIITL GRVPLLASLQ RTAILTSEKF KGVRLNIEPG TLRVASNNAE QEEAVDELDI DYGGDAIEIG FNVTYLIDAL ANMEQDMVKI ELADSNSSAL LTIPDDAAFK YVVMPMRI
|
| |