Gene Bpro_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0002 
Symbol 
ID4011738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1723 
End bp2829 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content60% 
IMG OID637939688 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_546867 
Protein GI91785915 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0963742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.484906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC TGAAAGCCAC CCAGGATAAA GTTTTGTCGG TACTGCAATC GGTCGCGGGC 
ATCGTGGAGC GCAGGCACAC CTTGCCGATC CTGGCCAACG TGCTGATCCG CAAAACCGGG
GCGCAGCTGC AGCTCACCAC GAGCGATCTT GAAATCCAGA TCCGCACCAG CGCCGACCTT
GATGGCGATG CCGGCAACTT CACCACCACG GTGGGTGCGC GCAAGCTCAT CGACATCCTG
CGGTCCATGC CCAGCGACCA GACCGTGTCG CTCGAGTCGG CGCAAAGCAA GCTGATCCTC
AAAGGCGGCA AGAGCCGCTT CACGCTGCAA ACCCTGCCCG CCGAAGACTT CCCGCTGGTG
CAGGAAGCCG CCAACTTCGG TCCCAGCTTC TCGGTACCGC AAAAGGTGCT CAAGGAGCTG
CTCAACCAGG TGTCGTTTGC GATGGCGGTG CACGACATCC GCTACTACCT CAACGGCATT
TTGTTTGTGG CTGAAGGCAA GCAGCTGAGC CTGGTGGCCA CCGACGGCCA CCGCCTGGCG
TTCTCGTCGG CCACGCTCGA TGTGGAAGTG CCCAAGCAGG AAGTCATCCT GCCGCGCAAG
ACGGTGCTGG AAATGCAGCG CCTGCTCAGC GACAAGGAAG GCGCCATCGA GATGCAGTTT
GCCGGTAACC AGGCCAAGTT CAGTTTTGAG GGCATGGAGT TTGTCACCAA GCTGGTCGAA
GGCAAATTTC CCGACTACAA CCGCGTGATT CCGAAGAACC ACAAAAACAT CATCACGCTG
GGCCGCGTGC CGCTGCTGGC CAGCCTGCAG CGCACCGCCA TTCTCACCAG CGAGAAGTTC
AAGGGCGTGC GCCTGAACAT CGAACCCGGT ACGCTGCGGG TGGCGTCCAA CAACGCCGAG
CAGGAAGAGG CCGTTGACGA GCTCGACATC GACTACGGCG GCGATGCCAT CGAAATCGGC
TTCAACGTGA CCTACCTGAT CGACGCGCTG GCCAACATGG AGCAGGACAT GGTGAAGATC
GAGCTGGCCG ACTCCAACAG CTCGGCGCTG CTCACCATTC CCGACGATGC GGCCTTTAAA
TACGTGGTGA TGCCCATGCG CATTTGA
 
Protein sequence
MIVLKATQDK VLSVLQSVAG IVERRHTLPI LANVLIRKTG AQLQLTTSDL EIQIRTSADL 
DGDAGNFTTT VGARKLIDIL RSMPSDQTVS LESAQSKLIL KGGKSRFTLQ TLPAEDFPLV
QEAANFGPSF SVPQKVLKEL LNQVSFAMAV HDIRYYLNGI LFVAEGKQLS LVATDGHRLA
FSSATLDVEV PKQEVILPRK TVLEMQRLLS DKEGAIEMQF AGNQAKFSFE GMEFVTKLVE
GKFPDYNRVI PKNHKNIITL GRVPLLASLQ RTAILTSEKF KGVRLNIEPG TLRVASNNAE
QEEAVDELDI DYGGDAIEIG FNVTYLIDAL ANMEQDMVKI ELADSNSSAL LTIPDDAAFK
YVVMPMRI