| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1642 |
|---|
| Symbol | |
|---|
| ID | 4000312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | - |
|---|
| Start bp | 1758148 |
|---|
| End bp | 1759509 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637938556 |
|---|
| Product | type II and III secretion system protein |
|---|
| Protein accession | YP_545751 |
|---|
| Protein GI | 91775995 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00375821 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.501633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCAT TCAATTCACG GGGAATATTG ACCTGCATCG CCGGGCTTGG CTTACTCTTT
TTCGGTCAAT GGCTCCAGGC CGAGGAAATA ATGGTCAGCA TGGGGCAGCA ACGGCTCTAC
GAGCACACCG TTACACTGCA GCGTGTCGCC GTCGCCAATC CGGAAGTGCT GGCGGTCACG
CTGACGAGCC CTAAAACCAT GATGATCGTG CCCAAGGCAG TGGGCGCCAC TGAAATCAGC
CTGTGGGATA GCCAGTCAGT TCAGCCCAGC AGGGTATTGC AGGTCAGCGT GACGCCTTCG
CTCGCGCTGG AGGGTCAAGG CCTGAAGGCG GCTGATGCCG CAGGTTTGCA GGTTGAAGCT
GCAGGGAACG GCCTTGCCTT ATCAGGGGAG GCCCGCTCGC TCGAAGAACA TGCCAGGGCG
CTGGAATCCT TGCAGAAAGA ACGGCAGGGT GCCTTGGATG TGACGAGCAG CGAGTTTGAT
AGCCATGTGC AGATCGACAT CAAGGTGGTG GAAGTCAGCA GGCAGAATGC GATGCGATTT
GGTTTCCTGA TGGGGAAAAA CAATAGCGCT AGCAGGGATG GTTTCGGTAT CGTAGCCTCG
CCAAACTCAT TTTCAGGAGT CGAAGCTGGC AGTGGCGGTT TCGATTTTTC GAGCACTTCT
GGGTTCCTGC CGGTCTTGAA TGCTTTTAAT GTCGTATTCG GTAACCATGG TTCTGGCCTA
TTGGGGACAC TCAGTATTCT GGAGGGCAAT GGTTTTGCCT ATACCCTCGC AGAGCCTTCC
TTATCTGCCA TCTCGGGCCA GACTGCCACC TTTCTCGCCG GGGGCGAGTT TCCTGTCCCC
ATCCGTACAG GGGGCGGCTC CGATAGTGCG ATCACGATCC GTTACAAGGA ATATGGTGTC
AGGCTGATGC TGACGCCGAC CATTCTCAGT GGCGAGCGTA TTTTTCTCAA AGTGGCGCCC
GAAGTCAGCG AACTGGATTT TGCCAATGCG GTGCAAACCG GCGGCGTGGC GGTGCCCGGG
CTCAAGGTCA GGCGCACGGA AACCAGCGTG TCGCTAGGCA ACGGGGAAAG CTTCGTGATC
AGCGGCATGG TGAGCCGCAA TACCATCAAC AACATAGACA AAGTGCCTGG GCTGGGCAAC
ATCCCAATCA TCGGCGCTTT CTTCAGCTCC AAGCGTTTCG ACCGCGAGGA TAAGGAGCTG
CTGATGGTCG TGACGCCGCG CCTGGTCCGC CCGATTGCCC GCAATGCCGA ATTGCCGGCC
CTGCCTGGGA GTGAGCTCAA ACACTACAAG CCGTCATTCA GCGAGTTTTT CCTCTCGCGT
GATGCTTATC CGAAACCAAG CTCAACAGGG ATGTCACGCT AA
|
|---|
| Protein sequence | MAAFNSRGIL TCIAGLGLLF FGQWLQAEEI MVSMGQQRLY EHTVTLQRVA VANPEVLAVT
LTSPKTMMIV PKAVGATEIS LWDSQSVQPS RVLQVSVTPS LALEGQGLKA ADAAGLQVEA
AGNGLALSGE ARSLEEHARA LESLQKERQG ALDVTSSEFD SHVQIDIKVV EVSRQNAMRF
GFLMGKNNSA SRDGFGIVAS PNSFSGVEAG SGGFDFSSTS GFLPVLNAFN VVFGNHGSGL
LGTLSILEGN GFAYTLAEPS LSAISGQTAT FLAGGEFPVP IRTGGGSDSA ITIRYKEYGV
RLMLTPTILS GERIFLKVAP EVSELDFANA VQTGGVAVPG LKVRRTETSV SLGNGESFVI
SGMVSRNTIN NIDKVPGLGN IPIIGAFFSS KRFDREDKEL LMVVTPRLVR PIARNAELPA
LPGSELKHYK PSFSEFFLSR DAYPKPSSTG MSR
|
|---|
| |