Gene Mfla_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1553 
Symbol 
ID4001144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1664640 
End bp1666028 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content56% 
IMG OID637938465 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_545662 
Protein GI91775906 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0294191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0154238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCCG CTTATGTACT GTTAGACCTC GAAACCACTG GCGCAACGCC CGTCACTGAC 
CGTATCACTG AGATCGGCCT CATCCGCTAT GAGAATGGCA TCGAGGTGAA GCGCTGGCAG
ACTCTGGTGA ATCCTGAAAT GCACATTTCG CCGTTCATCA CCTCCATCAC CGGCATCAGT
AATGCCATGG TCAAGGACGC TCCTCTGTTC AAGGATGTCG CCAATGAATT GCTTTCCCAC
CTGCACGGGG CGGTATTGTG CGCGCACAAT GTACGGTTCG ATTATGGATT CCTCAAGAAC
GAGTTCAGGC GCCTGGATAT CACATTGCGG CAGAACGTGC TCTGCACCGT CAAGCTATCG
CGCAGACTTT ATCCCGAATA CAAAAGCCAC GGCCTGGATG CCATCATCGC TCGCCACGGC
ATTGCCTGCG CTGCCAGGCA TCGCGCCATG GGCGATGTGG AAGTCATGGC GGAATTCCTG
CACATTGCAG AAGCCGAGCA TGGACTCGAG GCATTGAGGA CTGCAGCCGG GGAGCTGCTG
AAGGGCCAGT CGCTGCCCGC AGGCATCGAC CCGCAATTAG TGGACGACAT ACCAGAGGCG
CCCGGCGTAT ATATCTTCTA TGGCGAAAAC GACCTGCCCT TGTACATTGG GAAGAGCGTC
AACCTGCGTA ACCGCGTGCT ATCGCATTTC AACAGCGATC ACGCGCGGGC GCGCGGCATG
CGCATTACCC AGGAGATCAA GCACATCGAA TGGATAGAGA CTGCCGGAGA ATTTGGAGCG
CTGTTGCTGG AAGCGAGACT GATCAAGGAG CGTCAACCGA TACATAACCG GCAGTTGCGA
CGCGAGCAAC AGCTTTGTTC CTGGCATCTG GCGCCTTCTG CCACGCAACA TCCGCTGCTG
ACCCTGGTCG CCCAGGACGA AATGACACAG GACCTGCTGG GCGAGCTCTA CGGGACCTAT
CGTACCAAGC GCCAGGCCAT AGAAGCGCTG CGCCAGCTTG CCCTGGTGCA TGGGCTTTGC
CCACAGTATC TAGGGCTGGA AAGCGGCAAT GGGCCGTGTT TTTCATACCA GCTCAAACGC
TGCAAGGGAG TATGCTGCCA CCAAGAGCCG CCGGAAATGC ATTACCTGCG CCTGAAGCAG
GCACTGATCA GCCATCGCTT GAAATCATGG CCCTATCCCG GCAAGATCGG CATCCGCGAA
ACCAATCCCA AGCGTGGAAA ATCCGCAGTA CATGTGTTTG AGCACTGGTG CTACCTCGGC
TCGGCGGATG ACCATGACAG TCTGGATATC ATGCGCCACA CGAAGACGGC ATTCATCTTC
GATATCGATA CCTACAAACT GCTGTTAAAA CAGCTCAACA AACCCGGGGT GCAACTGTTA
CAACTCTAA
 
Protein sequence
MLPAYVLLDL ETTGATPVTD RITEIGLIRY ENGIEVKRWQ TLVNPEMHIS PFITSITGIS 
NAMVKDAPLF KDVANELLSH LHGAVLCAHN VRFDYGFLKN EFRRLDITLR QNVLCTVKLS
RRLYPEYKSH GLDAIIARHG IACAARHRAM GDVEVMAEFL HIAEAEHGLE ALRTAAGELL
KGQSLPAGID PQLVDDIPEA PGVYIFYGEN DLPLYIGKSV NLRNRVLSHF NSDHARARGM
RITQEIKHIE WIETAGEFGA LLLEARLIKE RQPIHNRQLR REQQLCSWHL APSATQHPLL
TLVAQDEMTQ DLLGELYGTY RTKRQAIEAL RQLALVHGLC PQYLGLESGN GPCFSYQLKR
CKGVCCHQEP PEMHYLRLKQ ALISHRLKSW PYPGKIGIRE TNPKRGKSAV HVFEHWCYLG
SADDHDSLDI MRHTKTAFIF DIDTYKLLLK QLNKPGVQLL QL