| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4928 |
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| Symbol | |
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| ID | 3973845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5498493 |
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| End bp | 5499599 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637928041 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_534769 |
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| Protein GI | 90426399 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.551599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGCTA GTCTCAACCC CATGGCGCCC ACTAGGCTCG GCGAGTTGAT GAAACGGTTT
CGAAACAATG TCATTCGCGC CGGACTCGGC GCGCTGTATT TCACCGGCGC CCATCACGCA
TTGCGGCCGA TCTTTGCAGG CGTCGGCACC ATCTTCGTGC TGCACCATGT CCGCCCGGCG
CGCGAGCACG GCTTCCAACC CAACCACCAC CTCGAGGTAA CGCCGGATTT CCTCCGCGCC
ACGCTGGGCT ATCTGCGCGC CAGCAGGACC GACATCGTCA GCCTCGACGA GGCGCGCCGG
CGGCTGGTCG AGCAGGACTT TTCCCGCCGC TTCGCCTGCG TGACGCTGGA CGACGGCTAC
CGCGACAACC GCGATTTCGC GCTGCCGCTG TTTCGCGAGT TCGAGGCGCC ATTCACGGTC
TACGTCACCA GCGATTTCGC CCAGGGCATC GGACGGCTGT GGTGGGTCGC GCTGGAGCGG
TTGATCGCCA AGACCGAGCA CATCGAAGTC ACCATCGACG GCATCGACGA ACGGATCGAT
ACCGCCGACG ACGCCGCCAA GCAGGCGGCG TTCGAGCGGC TGCACGGCTG GGTGCGCAAA
ATGGCGAGCG ACGCCGAGGT CGGCCGCGAG ATCGGCGCGC TGTGCGCGCG CCACGGCATC
GACGACCTCG ACATCAGCCG TGAACTCTGC CTGCGGTGGG ATGAGCTGAA AGCCTTCGCC
GAGGATCCGC TGGTCACCAT CGGGGTTCAC GGCATCACCC ACTGCAACCT CGCCAAGCAG
AGCGAGGTGA TCGCCCAACA CGAAATCGCC TACAGCCGCA AATGCATCGA AACCGCGCTG
CAGCGCCCGG CCGAGCATCT GGCCTATCCC TATGGCGACA AGGCCGCGGC CGGCCCGCGC
GAATTCGCGC TGGCGCAGAC CGCGGGCTTC AAGACCGCGG TAACCACCCG CCCCGGCATG
GTGTTCGCCG AAAACGCCGA CTATCTCACC GCGCTGCCGC GGCTGTCCTT GAACGGCAAC
TACCAGGACG AGCGGCTGCT GCCGGTGTTG ACCTCCGGCG CAGCCACCGC GATGTGGAAC
GGGTTCCGCC GCATCGACGC GGCGTAA
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| Protein sequence | MRASLNPMAP TRLGELMKRF RNNVIRAGLG ALYFTGAHHA LRPIFAGVGT IFVLHHVRPA
REHGFQPNHH LEVTPDFLRA TLGYLRASRT DIVSLDEARR RLVEQDFSRR FACVTLDDGY
RDNRDFALPL FREFEAPFTV YVTSDFAQGI GRLWWVALER LIAKTEHIEV TIDGIDERID
TADDAAKQAA FERLHGWVRK MASDAEVGRE IGALCARHGI DDLDISRELC LRWDELKAFA
EDPLVTIGVH GITHCNLAKQ SEVIAQHEIA YSRKCIETAL QRPAEHLAYP YGDKAAAGPR
EFALAQTAGF KTAVTTRPGM VFAENADYLT ALPRLSLNGN YQDERLLPVL TSGAATAMWN
GFRRIDAA
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