| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4899 |
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| Symbol | |
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| ID | 3973722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5468884 |
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| End bp | 5470227 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637928012 |
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| Product | L-sorbosone dehydrogenase |
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| Protein accession | YP_534740 |
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| Protein GI | 90426370 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.569758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGCC AATCTGTCAT TGCCGGCTGT CTCACCGCGC TAACGCTGCC GCTCGCCGCC
TGCAATGAGC AGGCCACCGT CACCGGCGGC GAGGATTTCG GCCCCTCGCC GACGCTGGTG
GCGCCGAAGT CGTCGCTGAT CCCCACCATC AACATCGCCA CCGTCAACCG CTGGTCCGAC
GGCGCCAAGC CGACGCCCGC GAGCGGCATG GCGGTGAACG CCTTCGCCAC CGGGCTCGAC
CATCCGCGCC AGCTCTACGT GCTGCCGAAC GGCGACGTGC TGGTCGCCGA GAGCAACGCG
CCGCCGAAGC CGGAGGACGG CAAGGGCATC CGCGCCTGGG CGCAGCGGCT GTTCCAGAAA
CGCGCCGGCG CGGTGACGCC CAGCGCCAAC CGCATCACCC TGTTGCGCGA TGCCGACGGC
GACGGTACAG CCGAAACCCG CAGCGCATTT CTCGAGGGAC TAAAGTCGCC GTTCGGCATG
GTGCTGGTCG GCGACGAGCT TTATGTCGCC AACGCCGATG CGGTGGTGAA ATTTCCCTAT
CGCAGCGGCG ACACCAGGAT CACCGCTGCC GCGGTGAAGG TCGCCGATCT GCCCGGCGGG
CCAATCAATC ATCACTGGAC CAAGGACATC ACCGCGAGCG CCGACGGAGC CAAGCTCTAC
GCCACCGTCG GCTCCAACAG CAACGTCGGC GAGAACGGCA TCGAAGCGGA AACCGACCGT
GCCGCGGTTC TGGAAATCGA CCGCGTCAGC GGCGCAAAGC GAGTGTTCGC CTCGGGCTTG
CGCAATCCGA ACAGTCCGTC CTGGCAGCCG CAGAGCGGCG CGCTGTGGGT CACGGTGAAC
GAACGCGACG AGATCGGCAG CGATCTGGTG CCGGACTACA TGACCTCGGT GCAGGACGGC
GGCTTCTACG GCTGGCCGTA CAGTTACTAC GGCCAGCACG TCGATGTGCG GGTCGAACCG
CAGCGGCCGG ATCTGGTGGC CAAGGCGATC GCGCCGGACT ACGCGCTCGG CGCCCATACC
GCCTCGCTGG GGCTGACCTT CAACACCGGC GAATTGTTTC CGGAAGCCAT GAAGGGCGGC
GCCTTCGTCG GCCAGCACGG CTCGTGGAAT CGCAACCCGC TTTCCGGTTA CAAGGTGATC
TTCGTGCCGT TCAAGGACGG CAAGCCCGCG GGCAAACCGC AGGACGTGCT GACCGGCTTT
CTCAACGACA AGGACGAAGC CCAGGGCCGC CCGGTCGGGG TCAAGATCGA CAAGCGCGGC
GCGCTATTGG TCGCCGACGA CGTCGGCAAT GTGGTGTGGC GGGTGACGCC GGACAGCGCG
CCGAAGGCGG CAGAGGCGAA GTAA
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| Protein sequence | MRRQSVIAGC LTALTLPLAA CNEQATVTGG EDFGPSPTLV APKSSLIPTI NIATVNRWSD
GAKPTPASGM AVNAFATGLD HPRQLYVLPN GDVLVAESNA PPKPEDGKGI RAWAQRLFQK
RAGAVTPSAN RITLLRDADG DGTAETRSAF LEGLKSPFGM VLVGDELYVA NADAVVKFPY
RSGDTRITAA AVKVADLPGG PINHHWTKDI TASADGAKLY ATVGSNSNVG ENGIEAETDR
AAVLEIDRVS GAKRVFASGL RNPNSPSWQP QSGALWVTVN ERDEIGSDLV PDYMTSVQDG
GFYGWPYSYY GQHVDVRVEP QRPDLVAKAI APDYALGAHT ASLGLTFNTG ELFPEAMKGG
AFVGQHGSWN RNPLSGYKVI FVPFKDGKPA GKPQDVLTGF LNDKDEAQGR PVGVKIDKRG
ALLVADDVGN VVWRVTPDSA PKAAEAK
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