Gene RPC_4818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4818 
Symbol 
ID3973522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5376507 
End bp5377133 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content66% 
IMG OID637927930 
ProductDSBA oxidoreductase 
Protein accessionYP_534659 
Protein GI90426289 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.228616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.843256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAG CCGTCGACTA CTATTTTTCG TTGCCGTCGC CCTGGGCCTA TCTTGGCCAC 
GGGCCGTTTC GCGAGGTCGT AAGTGATTAC GATCTCAAGG TGAATTACAA ACCCGTGGTG
CTGGTCGAGC TGTTCGCGGA AACCGGCGGG CTGCCGCTGG CCAAGCGCCA CCCGGCCCGG
CAGCGCTACC GGATGGTCGA GCTGCAACGC TGGCGCGCCA AGCGCGGACT GGACTTTCAG
CTGCGACCAA AGCACTGGCC GTTCAATGCG CGGCTGGCCG ACGGCGTGGT GATCGCGGCG
TGCGAGGCCG GGCACGACCC CGATGTTTTT CTGCGCCGCG CCTATGCGGC TATATGGGAA
GCCGAGCTCG ATCTGGCCGA TGCGGCGACG CTGGTCCGGC TCGCCGATCA ATCCGGCCTG
CCTGGCGGGG CTTTGGTGGA GCGCGCCGCC AGCGAGGCGA TCGGCTCCAT CTATGAACAG
AACCGCCACG ATGCGATCGC CGCCGACGTG TTCGGCTCGC CCGCCTATGT GCTGAATGGC
GAGGTGTTCT GGGGCCAGGA CCGCATCGAG CTGTTGGCCG ACGCCTTGAA ATCCGGCCGC
GGCCCCTTCC GCTGGCAGGA TTGCTGA
 
Protein sequence
MSQAVDYYFS LPSPWAYLGH GPFREVVSDY DLKVNYKPVV LVELFAETGG LPLAKRHPAR 
QRYRMVELQR WRAKRGLDFQ LRPKHWPFNA RLADGVVIAA CEAGHDPDVF LRRAYAAIWE
AELDLADAAT LVRLADQSGL PGGALVERAA SEAIGSIYEQ NRHDAIAADV FGSPAYVLNG
EVFWGQDRIE LLADALKSGR GPFRWQDC