| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4560 |
|---|
| Symbol | |
|---|
| ID | 3971840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5091319 |
|---|
| End bp | 5092218 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637927671 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_534401 |
|---|
| Protein GI | 90426031 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAGA AGTTCGAATA TCTCCTGGCG CTCGGACGCG AGAAACACTT TGGCCGCGCC
GCGCAAGTCT GTGGCGTTTC GCAGCCCAAC CTCTCGGCGG CCATCAAGCA ACTGGAGATT
CAGTTCGGCG TGATCCTGGT CGATCGCGGC GCGCGTTTCA TGGGCTTCAC GCCCGAAGGC
GAGCGGGTGC TGGATTGGGC GCGCAGCATC GTCGGCGATT TTCGCGCGAT GACCGCCGAA
ATCGAATCGA TGAAACAGGG CTACGCGGGG AATTTGCGGA TCGCGGCGAT TCCGACGTCG
TTGCCGATCC TGTCGCGGCT GACCGCGTCG TATTGGGAGC GGCATCCCGG CGTGCACGTC
TCGATCTCGT CGTGCAATTC CGCCGAGATC CTGGCCCGGC TGGAGAATCT CGAGACCGAT
ATCGGCATCA CCTATTTCGA TCGGGAATCG CTCGGCCGCA ACGCCGAAGT GCCGCTGTAT
CATGAGCGTT ATTGCCTGAT CGCCTGCCGC GACATGCCGC TGATGGACCG CCCGACGGTG
ACCTGGGAAG AGGTGGCGAC GCTGCCGTTG TGCCTGCCCT CGACCGACAT GCAGAATCGC
CGGATCTATG ATCGCATCTT CAAGGAGGTC GGCGTCACCG TGCAGCCGGC GATGGAGTCC
AACGACTTCA TCGTCCGCAT CGCGCATCTG CGCGCCGGAC GGCTGGCCAC GGTGATGCCG
CGGATCATGG CGGAAGACTG GTCGGTGCCG CCGGAATTGG TGTCGATCCC GATCGTCGCG
CCCGAAGTGA GCGCTCTGGT CGGCTTGCTC TACCCCAAGC GCGATCCGAT TCCGCCGTTG
ACCGCGGCGC TGATCCACGA AGCCCGCCAG TTGGTCCCGG TGCTGACCGC GATGGCCTGA
|
|---|
| Protein sequence | MYEKFEYLLA LGREKHFGRA AQVCGVSQPN LSAAIKQLEI QFGVILVDRG ARFMGFTPEG
ERVLDWARSI VGDFRAMTAE IESMKQGYAG NLRIAAIPTS LPILSRLTAS YWERHPGVHV
SISSCNSAEI LARLENLETD IGITYFDRES LGRNAEVPLY HERYCLIACR DMPLMDRPTV
TWEEVATLPL CLPSTDMQNR RIYDRIFKEV GVTVQPAMES NDFIVRIAHL RAGRLATVMP
RIMAEDWSVP PELVSIPIVA PEVSALVGLL YPKRDPIPPL TAALIHEARQ LVPVLTAMA
|
|---|
| |