Gene RPC_4558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4558 
Symbol 
ID3971838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5090066 
End bp5090338 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content65% 
IMG OID637927669 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_534399 
Protein GI90426029 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTCG GCATTCCCGT ACAAATCATC GCCGTCACCG ATGCGGACAA GATGCTGGCG 
CTCGCCGAGG TCAAGGGCGT GCGCCGCGAG ATCAACGTGA TGCTGGTCAG CGATCCCGCT
GAACCGATCG CGGCGTTGAT CGGGCGCTGG GTGCTGCTGC ATGTCGGCTT TGCGGTGTCG
CGGATCGACG AGGACGAGGC GCGGATCACG CTCGACCTGC TCGACGCCAC CGGCGCCGTG
GAAGAAGAAC TCGCCGTGAT GGCGCCGCAA TGA
 
Protein sequence
MCLGIPVQII AVTDADKMLA LAEVKGVRRE INVMLVSDPA EPIAALIGRW VLLHVGFAVS 
RIDEDEARIT LDLLDATGAV EEELAVMAPQ