| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4512 |
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| Symbol | |
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| ID | 3972290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5029505 |
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| End bp | 5031742 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637927623 |
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| Product | ABC transporter related |
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| Protein accession | YP_534354 |
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| Protein GI | 90425984 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0916306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGC GGGATTTGCT GAAGCGCCTG GAAACGTTTG CGGCCTCGGA TGACCCGAAG
AAGGGGGGCG TCGAGCCAGC GACGCCGGCC CCCTCAAGCA TCCGCGAGAA GTGCGCAGTC
AGCGTTGCCG CCGCGGCGAT CATTGCGCGC AACGGCGTCG ACATCCAGAC GGCCGAAGTC
TTTGCTTCGC TGGTCATATT CAGCGGCCAG GAGTTTCCGC TCAAGAACGT CCTCGGGGCA
TTGCCGCGCA ATTTGCCGTC GGAAGCCCAA ACGGTCGTCA CCATCGGGAT GGCAAATCTC
GGATTTTTCG TGGTCGATCG GCTGGCGTCG CGGGATGCCA TCGAAAACGG CGGGCCGGCT
GTTCTCGTCA ACGACCGTGG CGGGAAGTAT GTCGTCGTGA CCGATAGTCG GACCGGACAG
CTGTTCCAAC TGACGGCGAA TGCCGAGCCG GTTCCATACG ACCTGAAACG GCTCTCGTCA
TATGCGCGGG TCGCGACGTT CGAATATCGC AGCGCGATTG ATCCGTTGTC GGCAACGCGA
CGCGGGCATA CCGGGCTGCG CTGGATCGCC GCGCTGTCGA GCCGTTTTCA AGGCGTTTGG
CTGACGCTTG CCGGCATCAG CTTTCTGCTC GCCGTGCTCG GCGTGCTCTC CGCCGCGGCC
ATATCGACGA TTTTCTCGGA GGTGATCACG CGGGCCGCGC TCGGCACCTT GCCGCTGCTC
GCGGTCGGTC TGATCCTGAT CGTCGTCGCC GACGCCAAGC TCTCCGACCT GCGGTCGAAC
ATCTTGTCGT GGGTCGCCAA CCGGCTGGAG TTCATCGTCA ACGCCGCCTC ATTCGAACAC
ATCCTGAGGC TTCCGCCGTC TCTGTCGGAG CGGGCGTCGC CAGCGGCGCA GGCGGCGCGC
ATGCGCTCAT TCGAGGGGAT TCGGGATTTT CTCGTCAGTC CCGCCTGTCC GGCGGCGATG
GATATCGTGC TGGCGCCGTT CTACGCTGTG ATCGTCGCCT TGATCGACTG GCGCAGCGCG
CTGGTCCTGG TTGGCGCGAT GTTGGTGTTC GCACTGGTGT TCCTGATCGG CCTGCGCGCC
GCGAGGATCT ACATCTCGGT GGTGGCGGAC GCGGCAACCG AAGCGCAGCG CATCGCCATC
GAAACCTTCG ACCGATTGCA GACGATTAGC GACGTCGGGC TCCAGCATGT CTGGGCGACG
CGGCTCAGCG CCAGCCTGGT GCGCGATCAG GCCGCGCAGG CCCAATTGCA GAAGCTCGGC
GCAGCCATCG AAGCCGTCTC ATCGAGCGTG TTTTCCGGGT CGATCATCAT TCTGATGGTG
ATGCGAGGGC TCGCCGTTCA GTCGAGCATT ACCGGTGGGG TCGAGGTTCT GGCGATGACG
ATCCTCGGCC TGCGGTGTCT GCTGCCCTTC CACACGTTCT GTCTCTCGAT CCTGCGCATC
GAGCAGATCC GCAAGAGCGT GGCTCAGGTC AACGAGCTCA AGGAAATGCC GACCGAACTC
GAGAGGCTGA AGGGCCGCGA GCGGATGGAG GATCTTGCGG GCGCGCTCAG TCTCGTCAAC
GTCGGATTTC GCTCGGCGGA TACCAGGCCG GTGTTCGTCG CCCTCGATCT CGATGTGCGA
CCGGGCGAGG TCATCGCCTT GTATGGGCCG GCAGGAACCG GCAAATCGAT CATCCTCAAG
ATGATTCTCG GGATGATGGA GATCGGCCTC GGGGTGATCC GGCTCGATGG GGTCGATATC
AGGCAGTTCT CGGTCGAGGA GCTGCGCAGG CGCGTGTCCT ATGTGCCGCA GCAGCCGGCG
CTGCTCCCTG GCACGCTTCG CGAGAACCTG TTGCTGGCCA ATCCGCTGGC TTCCGACGCG
AGCCTGCAGG AGATACTGAA GGTCGTAGGC CTCGATGAAG ATGTCAGGCA ACTGCCGAAC
GGATTGGACT ATCACATCGC GGCCGACGAG GCTCGCGGCT TCAATGACGA ATTTCGTCTG
CGCGTCGCGT TCGCGCGGGC GTTCCTCACC AACAGCAAGC TCATTCTGAT CGACGAGCTT
CCCAACAGCC TGATGGAGGG CTCACTCGGC GAGCTGTTGC GGCGCATCAT CTCCGACTTC
CGCGGCGAGC GGACGATCGT CTTCGTGTCG CACCGGGCGG ACTTCCTGAG CCAGGCGGAT
CGGATGGTTG AACTTTCCTA TGGCGGCGTT CCCCGGATCG TGGCGGTCAG TCGAGCGAAA
AGCGAGAAGC GCGCATGA
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| Protein sequence | MTARDLLKRL ETFAASDDPK KGGVEPATPA PSSIREKCAV SVAAAAIIAR NGVDIQTAEV
FASLVIFSGQ EFPLKNVLGA LPRNLPSEAQ TVVTIGMANL GFFVVDRLAS RDAIENGGPA
VLVNDRGGKY VVVTDSRTGQ LFQLTANAEP VPYDLKRLSS YARVATFEYR SAIDPLSATR
RGHTGLRWIA ALSSRFQGVW LTLAGISFLL AVLGVLSAAA ISTIFSEVIT RAALGTLPLL
AVGLILIVVA DAKLSDLRSN ILSWVANRLE FIVNAASFEH ILRLPPSLSE RASPAAQAAR
MRSFEGIRDF LVSPACPAAM DIVLAPFYAV IVALIDWRSA LVLVGAMLVF ALVFLIGLRA
ARIYISVVAD AATEAQRIAI ETFDRLQTIS DVGLQHVWAT RLSASLVRDQ AAQAQLQKLG
AAIEAVSSSV FSGSIIILMV MRGLAVQSSI TGGVEVLAMT ILGLRCLLPF HTFCLSILRI
EQIRKSVAQV NELKEMPTEL ERLKGRERME DLAGALSLVN VGFRSADTRP VFVALDLDVR
PGEVIALYGP AGTGKSIILK MILGMMEIGL GVIRLDGVDI RQFSVEELRR RVSYVPQQPA
LLPGTLRENL LLANPLASDA SLQEILKVVG LDEDVRQLPN GLDYHIAADE ARGFNDEFRL
RVAFARAFLT NSKLILIDEL PNSLMEGSLG ELLRRIISDF RGERTIVFVS HRADFLSQAD
RMVELSYGGV PRIVAVSRAK SEKRA
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