| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4477 |
|---|
| Symbol | |
|---|
| ID | 3972489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4979908 |
|---|
| End bp | 4980762 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637927588 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_534319 |
|---|
| Protein GI | 90425949 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03309] selenium-dependent molybdenum hydroxylase system protein, YqeB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.321989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGAC CAGCCGACCA CAGAAAAAAG CGCTTCGCCA TCGTCCTCGG GACCAATGAG
GTCGCCTCCG CCGTGGCGGT GTACCTGCAT CGCGCGGATT TCGGCGTGGT GCTGTCCAAC
GACCCGGACT TTCCGGTGAT CCGTCGCAAG ATGGCCTTCG CGGATGCGCT GTATCGCGAC
GACGTCAAGG TCGAGGAGGT CCGCGGTGAG CGGGCCGACG ACGGTATGCA GGTATTCAAG
GGTCTGCGCA CATTCGACCG CGTATCGGTG ACCCGGCTCG GCCTCGCTGA CCTGCTGCCG
GTCGGCGCCA TGGACGTCCT GGTCGACGCC CGGCTGCAGC AGCACCGCAC CACCCCCGAC
CTGCATCGGC TGGCAAAATT GACGATCGGA ATCGGCGCCG GCTTTTCGGG CAGCACCAAT
TGCGACGTCG CGGTCGACGC CCCGCCCGAG CGCTGCGCCG GGGTGCTGCA TGACGGCTGG
ACCGCGGGCG CCACCTCGGC CGACGCCGCC GAGGCTGCGA ACCAACGCTT CGGATATGCG
CCGAGCGCCG GCCGCTGGCG CACCGCGGTG GAGATCGGTG CGCCGGTGCT GCGCGGCGCC
GTGCTCGGCC TGCTGACAGG CAACCCGCAT CGCGCGCCAT GCGATGGCGT GGTGCGCGGC
TTGATCCGCG ACGACAGCGA CGTGCCGGCC GGGGCCCGGC TGCTGGAGAT CGATCCGCGC
GGCCGCCACG CGCAATGGAC CGGGATCGAC GAGCGCGGAC GGAGCATTGC CAAGGCGGTG
CTGGACGCCG TGCAGCTGCG CAGCGAACGG CCCCGCGCCC TGATCGCCGC CGCCGCTTCG
CATCCCGCGG TCTGA
|
|---|
| Protein sequence | MHRPADHRKK RFAIVLGTNE VASAVAVYLH RADFGVVLSN DPDFPVIRRK MAFADALYRD
DVKVEEVRGE RADDGMQVFK GLRTFDRVSV TRLGLADLLP VGAMDVLVDA RLQQHRTTPD
LHRLAKLTIG IGAGFSGSTN CDVAVDAPPE RCAGVLHDGW TAGATSADAA EAANQRFGYA
PSAGRWRTAV EIGAPVLRGA VLGLLTGNPH RAPCDGVVRG LIRDDSDVPA GARLLEIDPR
GRHAQWTGID ERGRSIAKAV LDAVQLRSER PRALIAAAAS HPAV
|
|---|
| |