| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4438 |
|---|
| Symbol | |
|---|
| ID | 3970381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4945202 |
|---|
| End bp | 4946446 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637927549 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_534280 |
|---|
| Protein GI | 90425910 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT TTGCCCTTGC GGCGCGTCCC GAATTGCCGG CAACGGCGGC GCCCGGCTTG
AAAGCGCTGC AGCTGCGGCT GTTGTGGCTG GTCGGCGCCT GCGGCGCCAT CGTGTTCATC
GAACCGAGCC CCTATGAGAT CGCCATCGTG ATCGCGGTGG TGGTGTTCGC CGCCACCGGA
TTGCGGATGG CGCCGCCACT GTTGGTGCCG CTGACGCTGC TGATCGGCAT CTGCCTGGGT
TACGCGATCG GGGCCATCGA CCTGATCGAC GATCCCGAGA TTCTGACCTG GCTGTTGACC
TCCTGGTACA TGGCGACCAC CGCGATGTTC TTCGCGATGC TGGCGCTGCA GGACACCAGT
GCGCGCATCG ACGCGCTATT GCGCGGCTAT CTGTTCGGCG CGATCGTCGC GGCGCTGGCC
GGCATCGCCG GCTATTTCGG GGTGATCCCC GGCGCCGACG AGCTTTTGAC CTTTGCCGGC
CGGGCCCGCG GCACCTTCAA GGACCCCAAC GTGCTCGGCG CCTTCCTGGT GCTGCCGGCG
CTCTACACGC TGCTGCGGAT CATCGAAGGC TCGTTCTGGA GCGCGCTGCG CAACGGCGTG
GCGTTCGGCA TCCTCAGTCT GGCGATCTTT CTGGCGTTTT CGCGCGCCGC CTGGGGCACT
TTCGGCGGCG CCGCGTTGTT GATGGTGGCG CTGATGTTCA TCACCGCGCC GTCGCAGCAG
GCGCGCTTGC GCATCGTGAT GCTGGCGGTG GTCGCGCTGC TGCTGGCGGC CGCGGCGATC
GCCGTGCTGC TGTCGCTCGA CCAGGTCGCG GCCTTGTTCA AGGAGCGCGC CAGTTTCCAC
CAGCCCTATG ACAGCGGCCG GTTCGGCCGG TTCGGCCGCC ATCTGCTCGG CGCCGGCATG
GCGCTCGATT ATCCGACCGG CATCGGCCCG TTGCAGTTCA GGCGGTTCTT CCCGGAAGAC
ACCCATAATT CGTTTCTCAA CGCCTTCATG TCCGGCGGCT GGATCAGCGG CACCCTCTAT
CCGGCGCTGA TCTTCACCAC CGCGGGCTAC GGACTGCGTT TCGCCTTCGT CCGAACGCCC
TGGCAAAAAG CCTACATCCT GGTCATCTCG ACGCTGCTGG TGACGATGCT GGAGAGCTTC
ATCATCGACA CCGACCACTG GCGGCACTAT TTCATGCTGC TCGGCTTGAC CTGGGGACTG
GCGGTGGTCA GCAGCGGCTT TCGCGCGGCC GCACCCACGA CATGA
|
|---|
| Protein sequence | MTDFALAARP ELPATAAPGL KALQLRLLWL VGACGAIVFI EPSPYEIAIV IAVVVFAATG
LRMAPPLLVP LTLLIGICLG YAIGAIDLID DPEILTWLLT SWYMATTAMF FAMLALQDTS
ARIDALLRGY LFGAIVAALA GIAGYFGVIP GADELLTFAG RARGTFKDPN VLGAFLVLPA
LYTLLRIIEG SFWSALRNGV AFGILSLAIF LAFSRAAWGT FGGAALLMVA LMFITAPSQQ
ARLRIVMLAV VALLLAAAAI AVLLSLDQVA ALFKERASFH QPYDSGRFGR FGRHLLGAGM
ALDYPTGIGP LQFRRFFPED THNSFLNAFM SGGWISGTLY PALIFTTAGY GLRFAFVRTP
WQKAYILVIS TLLVTMLESF IIDTDHWRHY FMLLGLTWGL AVVSSGFRAA APTT
|
|---|
| |