Gene RPC_4436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4436 
Symbol 
ID3970379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4943814 
End bp4944356 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID637927547 
ProductNUDIX hydrolase 
Protein accessionYP_534278 
Protein GI90425908 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGG ATCGGCGAAA TTTGGCGGAG CCGTCGTTGG CGGCAGGCGG CATCGTGCTG 
CAAAGCTGCG CCGTGCCCCG GCTCGCGATC GTGCGGCTGC GCAAGCGCAA CCAATGGGTG
TTGCCGAAGG GCAAACTCGA CGCCGGCGAA ACGCCGCGTC AGGCGGCCGA ACGCGAGGTG
CTGGAAGAGA CCGGCCACCG CGTGTTGGTG CACGAGTTCA TCGGCACGCT GGCCTACAAC
ACCGGCGGAC GCTCCAAGGT GGTGCATTTC TGGCGCATGG AAGCCACCGC GGAGCCCACG
CTGCCGTTGA TGGACGACGT CAAAGAAGTG GCGTGGCTGC CGCTGGAGGT CGCGGTCGAG
CGGCTGTCGC GCGGCCATGA GCAGGCGTTC CTTACACACG TCGGGCCGCT GGCGCTGCAG
GCCGCGGCCG ACGCCGCCGG CGATCGCGAT GGCCCGCGGC GCGAACCGCC CGCGCCGGTT
TCGCCCGCCC GGATGCCGCT AACTGCGCTG CAACGCTTCT GGCGCTGGCT CAGGCGAGCC
TGA
 
Protein sequence
MKSDRRNLAE PSLAAGGIVL QSCAVPRLAI VRLRKRNQWV LPKGKLDAGE TPRQAAEREV 
LEETGHRVLV HEFIGTLAYN TGGRSKVVHF WRMEATAEPT LPLMDDVKEV AWLPLEVAVE
RLSRGHEQAF LTHVGPLALQ AAADAAGDRD GPRREPPAPV SPARMPLTAL QRFWRWLRRA