Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4436 |
Symbol | |
ID | 3970379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4943814 |
End bp | 4944356 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637927547 |
Product | NUDIX hydrolase |
Protein accession | YP_534278 |
Protein GI | 90425908 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGG ATCGGCGAAA TTTGGCGGAG CCGTCGTTGG CGGCAGGCGG CATCGTGCTG CAAAGCTGCG CCGTGCCCCG GCTCGCGATC GTGCGGCTGC GCAAGCGCAA CCAATGGGTG TTGCCGAAGG GCAAACTCGA CGCCGGCGAA ACGCCGCGTC AGGCGGCCGA ACGCGAGGTG CTGGAAGAGA CCGGCCACCG CGTGTTGGTG CACGAGTTCA TCGGCACGCT GGCCTACAAC ACCGGCGGAC GCTCCAAGGT GGTGCATTTC TGGCGCATGG AAGCCACCGC GGAGCCCACG CTGCCGTTGA TGGACGACGT CAAAGAAGTG GCGTGGCTGC CGCTGGAGGT CGCGGTCGAG CGGCTGTCGC GCGGCCATGA GCAGGCGTTC CTTACACACG TCGGGCCGCT GGCGCTGCAG GCCGCGGCCG ACGCCGCCGG CGATCGCGAT GGCCCGCGGC GCGAACCGCC CGCGCCGGTT TCGCCCGCCC GGATGCCGCT AACTGCGCTG CAACGCTTCT GGCGCTGGCT CAGGCGAGCC TGA
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Protein sequence | MKSDRRNLAE PSLAAGGIVL QSCAVPRLAI VRLRKRNQWV LPKGKLDAGE TPRQAAEREV LEETGHRVLV HEFIGTLAYN TGGRSKVVHF WRMEATAEPT LPLMDDVKEV AWLPLEVAVE RLSRGHEQAF LTHVGPLALQ AAADAAGDRD GPRREPPAPV SPARMPLTAL QRFWRWLRRA
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