Gene RPC_4412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4412 
Symbol 
ID3970390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4919650 
End bp4920555 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID637927521 
Producthypothetical protein 
Protein accessionYP_534254 
Protein GI90425884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.498323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.446109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGAT CCCCCTGGCT CGGGCTGTCG CTTCTGCTCG CGGTGTCGCT GCTGTGGGGC 
ACGTCCTTCG TGCTGATCGA GATCGCCGCG CAAGACTACG GCGCGCTGTC GATCGCGCTG
TCGAGAGCCG CCGTCGCCGC TGTGGTTCTC GGCGGGGTCG CGGTGCTGTC CGTGCGCCGG
CTGCGGATCG CGGCGCGCAT CTGGCCGCGC ATCGTGTTGC TCTCGGTGGT CGGGCAGGTG
GTGCCGTTCT TTCTGCTCGG CCTCAGCGGC CGTCTCACCA GCAGCAGCAG TTCAGCCGTG
ATGATGGGGG CAGCTCCGAT CGCAACGATC GTCGTCGCGG GGCTGATGTT GCAGGAGCGC
TGGTCGGCGG GGCGCTGGCT CGGCGTGGTC GTCGCGGGTG CCGGCGTGGT GATCGCGTTC
GGATGGAACG GCATCTTTCC ATCGCCCGCG CCGGCGGGTT TCGGATCGGA CGACGCGCTC
GGCAAGCTTT GCGCGCTGGG CGCCGCTCTC GGCTACGCGT TCGGCGCGAT CATCTTCCGG
TCGATCCCGC CGCAGATTCC GCCGATGGTC GTGGCGGCCC TGTCGCTGTC GTGCTCGTCG
CTGCTGTTGG CGGCTGGCGC CGTGCTGCAG GGAGATGCCC TGATTGCCTT TGGCCGTGCC
GGCGCCGCGT CGTCCACCGC GATGGTTGCT CTCGGTGTTC TGAATACCGG GTGCGCCTAC
GCGATCTACT ACAAGCTGAT CTCGATTTCG GGGGCGGGCT TCGCGTCGCT GAACAACTAT
CTCGTTCCGA TCATCGGCGC GACGGCGGGC GCCGTTCTGC TCGGCGAAGC GATCTCGTGG
AATTTGGCGC TGGGCCTGCT GATGATCGTC TGCGGCATTC TGCTGTCGGC TCTGCTGCAA
AACTAA
 
Protein sequence
MTGSPWLGLS LLLAVSLLWG TSFVLIEIAA QDYGALSIAL SRAAVAAVVL GGVAVLSVRR 
LRIAARIWPR IVLLSVVGQV VPFFLLGLSG RLTSSSSSAV MMGAAPIATI VVAGLMLQER
WSAGRWLGVV VAGAGVVIAF GWNGIFPSPA PAGFGSDDAL GKLCALGAAL GYAFGAIIFR
SIPPQIPPMV VAALSLSCSS LLLAAGAVLQ GDALIAFGRA GAASSTAMVA LGVLNTGCAY
AIYYKLISIS GAGFASLNNY LVPIIGATAG AVLLGEAISW NLALGLLMIV CGILLSALLQ
N