Gene RPC_4376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4376 
Symbol 
ID3970430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4880941 
End bp4881495 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID637927485 
Producthypothetical protein 
Protein accessionYP_534218 
Protein GI90425848 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.208442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0458426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGA TCGTTCTCGG CTTCCTCGGC ATTGTCTTTC TGTTCGCGCT CGGCGCCTAT 
AACCGGGTGG TGGCGCTGAG CCAGCGGATC GGCCAGGCGT TCGCCGACAT CGACGTGCAA
TTGAAGCAGC GCCACGACCT GATCCCGAAT CTGATCGAGA CGGTGAAGGG CTACGCCGCG
CATGAGCGCG GCACGCTCGA AGCCGTGGTG ACGGCACGCA ACGCCGCACT GTCGGCGCAT
AGCCCGGGCC AGATCGCCGC CACCGAGACT ACGCTGTCCG GCGCGCTCGG CCGGCTGATC
GCGCTGGCAG AGGCCTATCC CGACCTCAAG GCCAACGCCA ACTTCCAGCA ATTGCAGTCG
GAATTGTCCG ACATCGAGAA CAAGATCGCC GCCAGCCGGC GCTTCTTCAA CAACGCGGTG
CAGGAATACA ATACGGGGAT CCAGCAGATG CCGATGGCGC TGGTGGCCGG CGCGCTGGGC
TTCACCCCGA AGGAGTTCTT CGACCTCGGC GCCAGCCGCG CCGAGGTCGA ACAAGTGCCG
CAGGTCAAGT TCTGA
 
Protein sequence
MTWIVLGFLG IVFLFALGAY NRVVALSQRI GQAFADIDVQ LKQRHDLIPN LIETVKGYAA 
HERGTLEAVV TARNAALSAH SPGQIAATET TLSGALGRLI ALAEAYPDLK ANANFQQLQS
ELSDIENKIA ASRRFFNNAV QEYNTGIQQM PMALVAGALG FTPKEFFDLG ASRAEVEQVP
QVKF